RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 TMEM101Q96IK0 257 aa5.81□□□□□ -1.48
SNX4-205ENST00000482965 SMIM2Q9BVW6 85 aa5.81□□□□□ -1.48
SNX4-205ENST00000482965 IGLV10-54A0A075B6I4 117 aa5.8□□□□□ -1.48
SNX4-205ENST00000482965 TRAV8-4A0A0B4J246 113 aa5.8□□□□□ -1.48
SNX4-205ENST00000482965 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
SNX4-205ENST00000482965 TCAPO15273 167 aa5.8□□□□□ -1.48
SNX4-205ENST00000482965 APOC3P02656 99 aa5.8□□□□□ -1.48
SNX4-205ENST00000482965 SMAGPQ0VAQ4 97 aa5.8□□□□□ -1.48
SNX4-205ENST00000482965 OR5A1Q8NGJ0 315 aa5.8□□□□□ -1.48
SNX4-205ENST00000482965 NTN5Q8WTR8 489 aaPredicted RBP5.8□□□□□ -1.48
SNX4-205ENST00000482965 IGLV5-52A0A0A0MRZ9 124 aa5.79□□□□□ -1.48
SNX4-205ENST00000482965 SNAPINO95295 136 aa5.79□□□□□ -1.48
SNX4-205ENST00000482965 DGAT2L7PQ6IED9 249 aa5.79□□□□□ -1.48
SNX4-205ENST00000482965 SVBPQ8N300 66 aa5.79□□□□□ -1.48
SNX4-205ENST00000482965 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
SNX4-205ENST00000482965 MAP1LC3AQ9H492 121 aa5.79□□□□□ -1.48
SNX4-205ENST00000482965 LAMTOR2Q9Y2Q5 125 aa5.79□□□□□ -1.48
SNX4-205ENST00000482965 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.78□□□□□ -1.48
SNX4-205ENST00000482965 LOC389332A0A1B0GUA5 103 aa5.78□□□□□ -1.48
SNX4-205ENST00000482965 RAB5AP20339 215 aa5.78□□□□□ -1.48
SNX4-205ENST00000482965 GCSHP23434 173 aa5.78□□□□□ -1.48
SNX4-205ENST00000482965 C14orf177Q52M58 125 aa5.78□□□□□ -1.48
SNX4-205ENST00000482965 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
SNX4-205ENST00000482965 MRPL52Q86TS9 123 aaKnown RBP5.78□□□□□ -1.48
SNX4-205ENST00000482965 USP17L23D6RBM5 183 aa5.77□□□□□ -1.49
SNX4-205ENST00000482965 KIAA1644Q3SXP7 199 aa5.77□□□□□ -1.49
SNX4-205ENST00000482965 COX19Q49B96 90 aa5.77□□□□□ -1.49
SNX4-205ENST00000482965 ZNF664Q8N3J9 261 aa5.77□□□□□ -1.49
SNX4-205ENST00000482965 GNB1LQ9BYB4 327 aa5.77□□□□□ -1.49
SNX4-205ENST00000482965 CDC42SE2Q9NRR3 84 aa5.77□□□□□ -1.49
SNX4-205ENST00000482965 UBE2D4Q9Y2X8 147 aa5.77□□□□□ -1.49
SNX4-205ENST00000482965 DNAH5Q8TE73 4624 aa5.76□□□□□ -1.49
SNX4-205ENST00000482965 GAGE12HA6NDE8 117 aa5.76□□□□□ -1.49
SNX4-205ENST00000482965 PRSS47A8MTI9 375 aa5.76□□□□□ -1.49
SNX4-205ENST00000482965 KRTAP10-1P60331 282 aa5.76□□□□□ -1.49
SNX4-205ENST00000482965 RPL39P62891 51 aaKnown RBP5.76□□□□□ -1.49
SNX4-205ENST00000482965 Q8N8P6 123 aa5.76□□□□□ -1.49
SNX4-205ENST00000482965 CHCHD10Q8WYQ3 142 aaPredicted RBP5.76□□□□□ -1.49
SNX4-205ENST00000482965 TIMM21Q9BVV7 248 aa5.76□□□□□ -1.49
SNX4-205ENST00000482965 CSDC2Q9Y534 153 aaKnown RBP5.76□□□□□ -1.49
SNX4-205ENST00000482965 LRP1BQ9NZR2 4599 aa5.75□□□□□ -1.49
SNX4-205ENST00000482965 LINC00959A0A1B0GUT2 108 aa5.75□□□□□ -1.49
SNX4-205ENST00000482965 CDK2AP2O75956 126 aa5.75□□□□□ -1.49
SNX4-205ENST00000482965 MT-ND6P03923 174 aa5.75□□□□□ -1.49
SNX4-205ENST00000482965 SS18Q15532 418 aa5.75□□□□□ -1.49
SNX4-205ENST00000482965 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
SNX4-205ENST00000482965 Q6ZUT4 128 aa5.75□□□□□ -1.49
SNX4-205ENST00000482965 NXT2Q9NPJ8 142 aaKnown RBP5.75□□□□□ -1.49
SNX4-205ENST00000482965 TGIF2-C20orf24A0A0A6YYL0 155 aa5.74□□□□□ -1.49
SNX4-205ENST00000482965 CCL25O15444 150 aa5.74□□□□□ -1.49
SNX4-205ENST00000482965 PRSS1P07477 247 aa5.74□□□□□ -1.49
SNX4-205ENST00000482965 XCL1P47992 114 aa5.74□□□□□ -1.49
SNX4-205ENST00000482965 FABP9Q0Z7S8 132 aa5.74□□□□□ -1.49
SNX4-205ENST00000482965 SLC7A5P1Q8MH63 180 aa5.74□□□□□ -1.49
SNX4-205ENST00000482965 SPANXA1Q9NS26 97 aa5.74□□□□□ -1.49
SNX4-205ENST00000482965 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
SNX4-205ENST00000482965 hDV102S1A0JD36 115 aa5.73□□□□□ -1.49
SNX4-205ENST00000482965 K7EMI3 77 aa5.73□□□□□ -1.49
SNX4-205ENST00000482965 IFI27P40305 119 aaPredicted RBP5.73□□□□□ -1.49
SNX4-205ENST00000482965 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
SNX4-205ENST00000482965 CFAP161Q6P656 301 aa5.73□□□□□ -1.49
SNX4-205ENST00000482965 TRAV13-1A0A0B4J241 112 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 C1orf196B1AJZ1 125 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 MRPS36P82909 103 aaKnown RBP5.72□□□□□ -1.49
SNX4-205ENST00000482965 FOXI1Q12951 378 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 LINC01620Q4KN68 170 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 C2orf66Q6UXQ4 117 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 PRSS3P2Q8NHM4 247 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 OPRPNQ99935 248 aaPredicted RBP5.72□□□□□ -1.49
SNX4-205ENST00000482965 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
SNX4-205ENST00000482965 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 CYSLTR1Q9Y271 337 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 TRAPPC1Q9Y5R8 145 aa5.72□□□□□ -1.49
SNX4-205ENST00000482965 IFITM10A6NMD0 228 aa5.71□□□□□ -1.5
SNX4-205ENST00000482965 G0S2P27469 103 aa5.71□□□□□ -1.5
SNX4-205ENST00000482965 HIGD2BQ4VC39 106 aa5.71□□□□□ -1.5
SNX4-205ENST00000482965 CD164L2Q6UWJ8 174 aa5.71□□□□□ -1.5
SNX4-205ENST00000482965 C15orf56Q8N910 161 aa5.71□□□□□ -1.5
SNX4-205ENST00000482965 PYGO1Q9Y3Y4 419 aa5.71□□□□□ -1.5
SNX4-205ENST00000482965 IGLV4-3A0A075B6K6 122 aa5.7□□□□□ -1.5
SNX4-205ENST00000482965 IGHV1-58A0A0C4DH39 117 aa5.7□□□□□ -1.5
SNX4-205ENST00000482965 FA2HQ7L5A8 372 aa5.7□□□□□ -1.5
SNX4-205ENST00000482965 FAM104AQ969W3 186 aa5.7□□□□□ -1.5
SNX4-205ENST00000482965 TMEM141Q96I45 108 aa5.7□□□□□ -1.5
SNX4-205ENST00000482965 SMCO4Q9NRQ5 59 aa5.7□□□□□ -1.5
SNX4-205ENST00000482965 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
SNX4-205ENST00000482965 RYR1P21817 5038 aa5.7□□□□□ -1.5
SNX4-205ENST00000482965 HERC2O95714 4834 aa5.69□□□□□ -1.5
SNX4-205ENST00000482965 GVQW2A0A096LPI5 108 aaPredicted RBP5.69□□□□□ -1.5
SNX4-205ENST00000482965 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.69□□□□□ -1.5
SNX4-205ENST00000482965 COX7A2LO14548 114 aa5.69□□□□□ -1.5
SNX4-205ENST00000482965 MALP21145 153 aa5.69□□□□□ -1.5
SNX4-205ENST00000482965 XGP55808 180 aa5.69□□□□□ -1.5
SNX4-205ENST00000482965 CNBPP62633 177 aaKnown RBP5.69□□□□□ -1.5
SNX4-205ENST00000482965 HAMPP81172 84 aa5.69□□□□□ -1.5
SNX4-205ENST00000482965 Q6ZN92 141 aa5.69□□□□□ -1.5
SNX4-205ENST00000482965 TEX43Q6ZNM6 134 aa5.69□□□□□ -1.5
SNX4-205ENST00000482965 CBLN2Q8IUK8 224 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms