RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 ATP6V1G3Q96LB4 118 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 DUSP21Q9H596 190 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 OR5AC2Q9NZP5 309 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 TMEM14CQ9P0S9 112 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 TRBV20-1A0A075B6N2 111 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 TRAV1-2A0A0B4J238 106 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 LOC100130705A0A1B0GUX0 176 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 SMCO3A2RU48 225 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 C9orf92A6NGG3 77 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 FNDC10F2Z333 226 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 L7N2F9 121 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 UBE2L6O14933 153 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 RAB3BP20337 219 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 S100A4P26447 101 aaKnown RBP0.91□□□□□ -2.26
USH2A-204ENST00000481786 GABARAPL2P60520 117 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 SLC38A11Q08AI6 406 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 SMCO1Q147U7 214 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 TMEM241Q24JQ0 296 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 IAH1Q2TAA2 248 aaPredicted RBP0.91□□□□□ -2.26
USH2A-204ENST00000481786 MIR7-3HGQ8N6C7 128 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 DYNC2LI1Q8TCX1 351 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 GLYATL2Q8WU03 294 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 ZCCHC13Q8WW36 166 aaKnown RBP0.91□□□□□ -2.26
USH2A-204ENST00000481786 SFRP2Q96HF1 295 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 CIB3Q96Q77 187 aaPredicted RBP0.91□□□□□ -2.26
USH2A-204ENST00000481786 PFDN5Q99471 154 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 TMEM243Q9BU79 118 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 SLIRPQ9GZT3 109 aaKnown RBP0.91□□□□□ -2.26
USH2A-204ENST00000481786 SMDT1Q9H4I9 107 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 TREM1Q9NP99 234 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 ACOT13Q9NPJ3 140 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 RHBDL2Q9NX52 303 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 MRPL35Q9NZE8 188 aaKnown RBP0.91□□□□□ -2.26
USH2A-204ENST00000481786 IL36BQ9NZH7 164 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 COPZ2Q9P299 210 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 EXTL2Q9UBQ6 330 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 PAIP2BQ9ULR5 123 aaKnown RBP0.91□□□□□ -2.26
USH2A-204ENST00000481786 ANAPC10Q9UM13 185 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 AP4S1Q9Y587 144 aa0.91□□□□□ -2.26
USH2A-204ENST00000481786 PIGBOS1A0A0B4J2F0 54 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 F6UZH7 168 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 CCL25O15444 150 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 IGLV6-57P01721 117 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 NBEAP1P0C6P0 100 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 MYL9P24844 172 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 PRSS3P35030 304 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 FABP5Q01469 135 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 ZNF56Q15929 161 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 PRNTQ86SH4 94 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 SELENOHQ8IZQ5 122 aaKnown RBP0.9□□□□□ -2.27
USH2A-204ENST00000481786 OR10D4PQ8NGN7 298 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 OR1L4Q8NGR5 311 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 C15orf40Q8WUR7 153 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 BTF3L4Q96K17 158 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 BCL7BQ9BQE9 202 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 SLC25A21Q9BQT8 299 aaPredicted RBP0.9□□□□□ -2.27
USH2A-204ENST00000481786 MND1Q9BWT6 205 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 SLC25A2Q9BXI2 301 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 C11orf1Q9H5F2 150 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 GEMIN7Q9H840 131 aaKnown RBP0.9□□□□□ -2.27
USH2A-204ENST00000481786 LYRM2Q9NU23 88 aaPredicted RBP0.9□□□□□ -2.27
USH2A-204ENST00000481786 SHPKQ9UHJ6 478 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 C22orf24Q9Y442 160 aa0.9□□□□□ -2.27
USH2A-204ENST00000481786 MUC5BQ9HC84 5762 aaPredicted RBP0.9□□□□□ -2.27
USH2A-204ENST00000481786 FXYD6-FXYD2A0A087WZ82 144 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 LINC00959A0A1B0GUT2 108 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 NDUFC2-KCTD14E9PQ53 114 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 G3V3Q6 166 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 K7EQM0 130 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 M0R036 132 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 M0R381 172 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 COX7A2LO14548 114 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 NDUFA1O15239 70 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 SYNGR2O43760 224 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 CIB2O75838 187 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 CST7O76096 145 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 RAB3DO95716 219 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 GCGP01275 180 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 APCSP02743 223 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 TCRAP04437 139 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 P0C880 135 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 PYYP10082 97 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 IAPPP10997 89 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 ZNF25P17030 456 aaPredicted RBP0.89□□□□□ -2.27
USH2A-204ENST00000481786 NTF3P20783 257 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 TGFBR1P36897 503 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 TAGLN2P37802 199 aaKnown RBP0.89□□□□□ -2.27
USH2A-204ENST00000481786 RANP62826 216 aaKnown RBP0.89□□□□□ -2.27
USH2A-204ENST00000481786 SPAG11BQ08648 103 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 SMUG1Q53HV7 270 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 SPANXN5Q5MJ07 72 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 AMMECR1LQ6DCA0 310 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 TEX43Q6ZNM6 134 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 MRPL55Q7Z7F7 128 aaKnown RBP0.89□□□□□ -2.27
USH2A-204ENST00000481786 ZFP82Q8N141 532 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 GPX8Q8TED1 209 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 ANP32BQ92688 251 aaKnown RBP0.89□□□□□ -2.27
USH2A-204ENST00000481786 PLEKHB2Q96CS7 222 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 PACRGQ96M98 296 aaPredicted RBP0.89□□□□□ -2.27
USH2A-204ENST00000481786 GNB1LQ9BYB4 327 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms