RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 NUPR1O60356 82 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 IGHV3-30P01768 117 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 IGHV3-30-3P0DP02 117 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 IGHV3-30-5P0DP03 117 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 NDUFA6P56556 154 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 TMEM141Q96I45 108 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 CDC42SE2Q9NRR3 84 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 PRR34Q9NV39 138 aa8.48□□□□□ -1.05
TRAPPC12-218ENST00000479897 IGLV4-3A0A075B6K6 122 aa8.47□□□□□ -1.05
TRAPPC12-218ENST00000479897 IBA57-AS1B1ANH7 110 aa8.47□□□□□ -1.05
TRAPPC12-218ENST00000479897 DGAT2L7PQ6IED9 249 aa8.47□□□□□ -1.05
TRAPPC12-218ENST00000479897 Q6ZR54 194 aa8.47□□□□□ -1.05
TRAPPC12-218ENST00000479897 Q6ZUT4 128 aa8.47□□□□□ -1.05
TRAPPC12-218ENST00000479897 PACRGQ96M98 296 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC12-218ENST00000479897 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
TRAPPC12-218ENST00000479897 ANGP03950 147 aaKnown RBP8.46□□□□□ -1.06
TRAPPC12-218ENST00000479897 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.06
TRAPPC12-218ENST00000479897 FAM19A2Q8N3H0 131 aa8.46□□□□□ -1.06
TRAPPC12-218ENST00000479897 ZNF664Q8N3J9 261 aa8.46□□□□□ -1.06
TRAPPC12-218ENST00000479897 SCGB3A1Q96QR1 104 aa8.46□□□□□ -1.06
TRAPPC12-218ENST00000479897 KLK12Q9UKR0 248 aa8.46□□□□□ -1.06
TRAPPC12-218ENST00000479897 ATP5LO75964 103 aa8.45□□□□□ -1.06
TRAPPC12-218ENST00000479897 S100A6P06703 90 aa8.45□□□□□ -1.06
TRAPPC12-218ENST00000479897 AMELXQ99217 191 aa8.45□□□□□ -1.06
TRAPPC12-218ENST00000479897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 CRPP02741 224 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 REG3AQ06141 175 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 MIAQ16674 131 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 ENHOQ6UWT2 76 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 Q6ZN92 141 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 LINC00173Q6ZV60 143 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 LINC00269Q8N2A0 174 aa8.44□□□□□ -1.06
TRAPPC12-218ENST00000479897 SACSQ9NZJ4 4579 aa8.43□□□□□ -1.06
TRAPPC12-218ENST00000479897 TRAV8-3A0A0A6YYJ7 113 aa8.43□□□□□ -1.06
TRAPPC12-218ENST00000479897 CCL25O15444 150 aa8.43□□□□□ -1.06
TRAPPC12-218ENST00000479897 TEX43Q6ZNM6 134 aa8.43□□□□□ -1.06
TRAPPC12-218ENST00000479897 BAALCQ8WXS3 180 aa8.43□□□□□ -1.06
TRAPPC12-218ENST00000479897 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC12-218ENST00000479897 TRAV8-4A0A0B4J246 113 aa8.42□□□□□ -1.06
TRAPPC12-218ENST00000479897 C5orf52A6NGY3 159 aa8.42□□□□□ -1.06
TRAPPC12-218ENST00000479897 HIST3H2BBQ8N257 126 aa8.42□□□□□ -1.06
TRAPPC12-218ENST00000479897 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
TRAPPC12-218ENST00000479897 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
TRAPPC12-218ENST00000479897 HSPB8Q9UJY1 196 aa8.42□□□□□ -1.06
TRAPPC12-218ENST00000479897 KMT2CQ8NEZ4 4911 aaKnown RBP8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 PMVKQ15126 192 aa8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 CLPSL2Q6UWE3 100 aa8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 RMI2Q96E14 147 aa8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 C2orf88Q9BSF0 95 aa8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 VCX2Q9H322 139 aa8.41□□□□□ -1.06
TRAPPC12-218ENST00000479897 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
TRAPPC12-218ENST00000479897 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.06
TRAPPC12-218ENST00000479897 IFITM10A6NMD0 228 aa8.4□□□□□ -1.06
TRAPPC12-218ENST00000479897 SNRPEP62304 92 aaKnown RBP8.4□□□□□ -1.06
TRAPPC12-218ENST00000479897 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
TRAPPC12-218ENST00000479897 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
TRAPPC12-218ENST00000479897 UBE2D1P51668 147 aa8.39□□□□□ -1.07
TRAPPC12-218ENST00000479897 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC12-218ENST00000479897 C6orf223Q8N319 242 aa8.39□□□□□ -1.07
TRAPPC12-218ENST00000479897 CST9LQ9H4G1 147 aa8.39□□□□□ -1.07
TRAPPC12-218ENST00000479897 COX11Q9Y6N1 276 aa8.39□□□□□ -1.07
TRAPPC12-218ENST00000479897 RYR2Q92736 4967 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 M0R2N4 97 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 FABP4P15090 132 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 S100A2P29034 98 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 SS18Q15532 418 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 KRTAP26-1Q6PEX3 210 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 C1orf43Q9BWL3 253 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 TM2D2Q9BX73 214 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 Q9HAA7 133 aa8.38□□□□□ -1.07
TRAPPC12-218ENST00000479897 TRAV13-1A0A0B4J241 112 aa8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 IGKV3OR2-268A0A0C4DH90 116 aa8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 SEC11AP67812 179 aa8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 MAP1LC3CQ9BXW4 147 aa8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
TRAPPC12-218ENST00000479897 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
TRAPPC12-218ENST00000479897 PRSS1P07477 247 aa8.36□□□□□ -1.07
TRAPPC12-218ENST00000479897 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
TRAPPC12-218ENST00000479897 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
TRAPPC12-218ENST00000479897 CD164L2Q6UWJ8 174 aa8.36□□□□□ -1.07
TRAPPC12-218ENST00000479897 FRAS1Q86XX4 4008 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 IGLV10-54A0A075B6I4 117 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 F8VRH5 84 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 HERVK_113P63121 156 aa8.35□□□□□ -1.07
TRAPPC12-218ENST00000479897 ODF1Q14990 250 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms