RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 FAM19A4Q96LR4 140 aa4.46□□□□□ -1.7
SF3B1-209ENST00000479532 SGK494Q96LW2 274 aa4.46□□□□□ -1.7
SF3B1-209ENST00000479532 PRELID3AQ96N28 172 aa4.46□□□□□ -1.7
SF3B1-209ENST00000479532 GIG44P09565 113 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-209ENST00000479532 HTN1P15515 57 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 FAM159AQ6UWV7 190 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 C1orf158Q8N1D5 194 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 ZFAND2AQ8N6M9 145 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 RAB37Q96AX2 223 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 C16orf74Q96GX8 76 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 C20orf78Q9BR46 151 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 CHAC1Q9BUX1 264 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 C11orf68Q9H3H3 251 aaKnown RBP4.45□□□□□ -1.7
SF3B1-209ENST00000479532 KLF12Q9Y4X4 402 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
SF3B1-209ENST00000479532 IGHV1OR15-1A0A075B7D0 117 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 IGHV4-28A0A0C4DH34 117 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 TRBV7-7A0A0K0K1E9 115 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 HIGD1CA8MV81 97 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 M0R2P5 195 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 LTAP01374 205 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 IGLV2-11P01706 119 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 RPL13AP40429 203 aaKnown RBP4.44□□□□□ -1.7
SF3B1-209ENST00000479532 UBE2D3P61077 147 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 UBE2D2P62837 147 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 ZNF415Q09FC8 603 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 ZNF493Q6ZR52 646 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 TMEM263Q8WUH6 116 aaKnown RBP4.44□□□□□ -1.7
SF3B1-209ENST00000479532 RPL36ALQ969Q0 106 aaKnown RBP4.44□□□□□ -1.7
SF3B1-209ENST00000479532 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 LINC00467Q9BRT7 94 aa4.44□□□□□ -1.7
SF3B1-209ENST00000479532 A0A0J9YWU9 116 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 ATP5LO75964 103 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 HBDP02042 147 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 MGST1P10620 155 aaKnown RBP4.43□□□□□ -1.7
SF3B1-209ENST00000479532 FXYD2P54710 66 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 EMP1P54849 157 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 C12orf74Q32Q52 190 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 PRR9Q5T870 116 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 SH2D6Q7Z4S9 175 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 NRACQ8N912 160 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 Q8NAQ8 132 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 RASL10AQ92737 203 aa4.43□□□□□ -1.7
SF3B1-209ENST00000479532 RNASE7Q9H1E1 156 aaKnown RBP4.43□□□□□ -1.7
SF3B1-209ENST00000479532 RPP21Q9H633 154 aaKnown RBP4.43□□□□□ -1.7
SF3B1-209ENST00000479532 TIMM8BQ9Y5J9 83 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-209ENST00000479532 MEGF8Q7Z7M0 2845 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 C19orf71A6NCJ1 209 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 LYRM9A8MSI8 78 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 A8MWV9 139 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 UQCRQO14949 82 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 NCR2O95944 276 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 ORM1P02763 201 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 CRYGDP07320 174 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 SPART-AS1P0CW21 52 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 RBMY1A1P0DJD3 496 aaKnown RBP4.42□□□□□ -1.7
SF3B1-209ENST00000479532 RBMY1CP0DJD4 496 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 S100A4P26447 101 aaKnown RBP4.42□□□□□ -1.7
SF3B1-209ENST00000479532 RIGQ13278 110 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 RBMY1FQ15415 496 aaKnown RBP4.42□□□□□ -1.7
SF3B1-209ENST00000479532 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 COX8CQ7Z4L0 72 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 ZC2HC1AQ96GY0 325 aa4.42□□□□□ -1.7
SF3B1-209ENST00000479532 TRBV7-3A0A075B6L6 115 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 TRBV25-1A0A075B6N4 114 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 MYMXA0A1B0GTQ4 84 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 DEFB4AO15263 64 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 SH2D1AO60880 128 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 ACYP1P07311 99 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 SCGB1C2P0DMR2 95 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 ZNF80P51504 273 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-209ENST00000479532 DAD1P61803 113 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 TWIST1Q15672 202 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 MEIG1Q5JSS6 88 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 PPDPFQ9H3Y8 114 aa4.41□□□□□ -1.7
SF3B1-209ENST00000479532 NHP2Q9NX24 153 aaKnown RBP4.41□□□□□ -1.7
SF3B1-209ENST00000479532 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 NPYP01303 97 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 P01737 135 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 UBE2D1P51668 147 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.71
SF3B1-209ENST00000479532 FAM222AQ5U5X8 452 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 LINC00173Q6ZV60 143 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 NFE4Q86UQ8 179 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 LINC00526Q96FQ7 95 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 PRADC1Q9BSG0 188 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 EDA2RQ9HAV5 297 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 NOP10Q9NPE3 64 aaKnown RBP4.4□□□□□ -1.71
SF3B1-209ENST00000479532 TP73-AS1Q9UF72 201 aa4.4□□□□□ -1.71
SF3B1-209ENST00000479532 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
SF3B1-209ENST00000479532 TRGV2A0A075B6R0 118 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 TMSB15BA0A087X1C1 80 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 A0A096LNJ9 63 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 TRGV1A0A0A0MS02 117 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 IGHV3-16A0A0C4DH30 117 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 A0A1B0GUT8 65 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 NUPR2A6NF83 97 aa4.39□□□□□ -1.71
SF3B1-209ENST00000479532 LINC01549A6NIU2 74 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms