RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
C9orf85-205ENST00000479413 IGHV3-64A0A075B6Q5 118 aa9.11□□□□□ -0.95
C9orf85-205ENST00000479413 MGPP08493 103 aa9.11□□□□□ -0.95
C9orf85-205ENST00000479413 CIRBPQ14011 172 aaKnown RBP9.11□□□□□ -0.95
C9orf85-205ENST00000479413 WDR73Q6P4I2 378 aa9.11□□□□□ -0.95
C9orf85-205ENST00000479413 TPPP3Q9BW30 176 aa9.11□□□□□ -0.95
C9orf85-205ENST00000479413 GNB1LQ9BYB4 327 aa9.11□□□□□ -0.95
C9orf85-205ENST00000479413 SMIM27A0A1W2PRY6 76 aa9.1□□□□□ -0.95
C9orf85-205ENST00000479413 M0QY20 66 aa9.1□□□□□ -0.95
C9orf85-205ENST00000479413 RNF185Q96GF1 192 aa9.1□□□□□ -0.95
C9orf85-205ENST00000479413 TMEM243Q9BU79 118 aa9.1□□□□□ -0.95
C9orf85-205ENST00000479413 XKRY2A2RUG3 117 aa9.09□□□□□ -0.95
C9orf85-205ENST00000479413 MT1HL1P0DM35 61 aa9.09□□□□□ -0.95
C9orf85-205ENST00000479413 GZMBP10144 247 aa9.09□□□□□ -0.95
C9orf85-205ENST00000479413 CT83Q5H943 113 aa9.09□□□□□ -0.95
C9orf85-205ENST00000479413 PKHD1L1Q86WI1 4243 aa9.09□□□□□ -0.95
C9orf85-205ENST00000479413 A0A1B0GUV1 79 aa9.08□□□□□ -0.96
C9orf85-205ENST00000479413 SUMO4Q6EEV6 95 aa9.08□□□□□ -0.96
C9orf85-205ENST00000479413 FER1L6-AS1Q8NA97 138 aa9.08□□□□□ -0.96
C9orf85-205ENST00000479413 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
C9orf85-205ENST00000479413 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
C9orf85-205ENST00000479413 PACRGQ96M98 296 aaPredicted RBP9.08□□□□□ -0.96
C9orf85-205ENST00000479413 HIST1H2BLQ99880 126 aa9.08□□□□□ -0.96
C9orf85-205ENST00000479413 NIT2Q9NQR4 276 aa9.08□□□□□ -0.96
C9orf85-205ENST00000479413 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
C9orf85-205ENST00000479413 UBE2L6O14933 153 aa9.07□□□□□ -0.96
C9orf85-205ENST00000479413 GATCO43716 136 aaKnown RBP9.07□□□□□ -0.96
C9orf85-205ENST00000479413 ESDP10768 282 aa9.07□□□□□ -0.96
C9orf85-205ENST00000479413 RPS20P60866 119 aaKnown RBP9.07□□□□□ -0.96
C9orf85-205ENST00000479413 CACNG7P62955 275 aa9.07□□□□□ -0.96
C9orf85-205ENST00000479413 PYY3Q5JQD4 70 aa9.07□□□□□ -0.96
C9orf85-205ENST00000479413 OR10D4PQ8NGN7 298 aa9.07□□□□□ -0.96
C9orf85-205ENST00000479413 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
C9orf85-205ENST00000479413 IGLV4-60A0A075B6I1 120 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 A0A087WYN8 130 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 IGLC6P0CF74 106 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 CHTF8P0CG12 524 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 OR2D3Q8NGH3 330 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 SPACA4Q8TDM5 124 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 C7orf33Q8WU49 177 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
C9orf85-205ENST00000479413 F2Z2F3 143 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 FABP4P15090 132 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 JOSD1Q15040 202 aaPredicted RBP9.05□□□□□ -0.96
C9orf85-205ENST00000479413 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 NUDT10Q8NFP7 164 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 TSKUQ8WUA8 353 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 NUDT11Q96G61 164 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 GFRA4Q9GZZ7 299 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 MRPL18Q9H0U6 180 aaKnown RBP9.05□□□□□ -0.96
C9orf85-205ENST00000479413 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
C9orf85-205ENST00000479413 NAT8BQ9UHF3 227 aa9.05□□□□□ -0.96
C9orf85-205ENST00000479413 A8MWL6 223 aa9.04□□□□□ -0.96
C9orf85-205ENST00000479413 SLPIP03973 132 aa9.04□□□□□ -0.96
C9orf85-205ENST00000479413 AMTP48728 403 aa9.04□□□□□ -0.96
C9orf85-205ENST00000479413 COTL1Q14019 142 aa9.04□□□□□ -0.96
C9orf85-205ENST00000479413 TMEM136Q6ZRR5 245 aa9.04□□□□□ -0.96
C9orf85-205ENST00000479413 C19orf71A6NCJ1 209 aa9.03□□□□□ -0.96
C9orf85-205ENST00000479413 PCP4L1A6NKN8 68 aa9.03□□□□□ -0.96
C9orf85-205ENST00000479413 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
C9orf85-205ENST00000479413 RPP21Q9H633 154 aaKnown RBP9.02□□□□□ -0.97
C9orf85-205ENST00000479413 GAGE12HA6NDE8 117 aa9.01□□□□□ -0.97
C9orf85-205ENST00000479413 FOXA3P55318 350 aaPredicted RBP9.01□□□□□ -0.97
C9orf85-205ENST00000479413 COX6A2Q02221 97 aa9.01□□□□□ -0.97
C9orf85-205ENST00000479413 PDZD11Q5EBL8 140 aa9.01□□□□□ -0.97
C9orf85-205ENST00000479413 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 NTF3P20783 257 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 MAJINQ3KP22 176 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 AMMECR1LQ6DCA0 310 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 LYZL1Q6UWQ5 148 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 C15orf56Q8N910 161 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 NUP35Q8NFH5 326 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 GTSF1Q8WW33 167 aa9□□□□□ -0.97
C9orf85-205ENST00000479413 IGKV2-24A0A0C4DH68 120 aa8.99□□□□□ -0.97
C9orf85-205ENST00000479413 A0A1B0GXF2 115 aa8.99□□□□□ -0.97
C9orf85-205ENST00000479413 HIGD2BQ4VC39 106 aa8.99□□□□□ -0.97
C9orf85-205ENST00000479413 A0A1B0GW15 77 aa8.98□□□□□ -0.97
C9orf85-205ENST00000479413 HIGD1CA8MV81 97 aa8.98□□□□□ -0.97
C9orf85-205ENST00000479413 APCSP02743 223 aa8.98□□□□□ -0.97
C9orf85-205ENST00000479413 PRR3P79522 188 aaKnown RBP8.98□□□□□ -0.97
C9orf85-205ENST00000479413 TWIST1Q15672 202 aa8.98□□□□□ -0.97
C9orf85-205ENST00000479413 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
C9orf85-205ENST00000479413 CTRLP40313 264 aa8.97□□□□□ -0.97
C9orf85-205ENST00000479413 BAGE3Q86Y29 109 aa8.97□□□□□ -0.97
C9orf85-205ENST00000479413 STPG4Q8N801 248 aa8.97□□□□□ -0.97
C9orf85-205ENST00000479413 GATD1Q8NB37 220 aa8.97□□□□□ -0.97
C9orf85-205ENST00000479413 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
C9orf85-205ENST00000479413 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
C9orf85-205ENST00000479413 GVQW2A0A096LPI5 108 aaPredicted RBP8.96□□□□□ -0.98
C9orf85-205ENST00000479413 NCR2O95944 276 aa8.96□□□□□ -0.98
C9orf85-205ENST00000479413 HBBP68871 147 aa8.96□□□□□ -0.98
C9orf85-205ENST00000479413 CTAG1AP78358 180 aa8.96□□□□□ -0.98
C9orf85-205ENST00000479413 MRPL54Q6P161 138 aaKnown RBP8.96□□□□□ -0.98
C9orf85-205ENST00000479413 RNASEKQ6P5S7 137 aaKnown RBP8.96□□□□□ -0.98
C9orf85-205ENST00000479413 LINC01600Q96MT4 127 aa8.96□□□□□ -0.98
C9orf85-205ENST00000479413 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
C9orf85-205ENST00000479413 TSTD3H0UI37 97 aa8.95□□□□□ -0.98
C9orf85-205ENST00000479413 H7C423 109 aa8.95□□□□□ -0.98
C9orf85-205ENST00000479413 SERF1AO75920 110 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms