RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	UBE2D4	Q9Y2X8	147 aa		11.97	□□□□□ -0.49
RFK-204	ENST00000479197		A0A087WTM6	91 aa		11.96	□□□□□ -0.49
RFK-204	ENST00000479197		K7EMI3	77 aa		11.96	□□□□□ -0.49
RFK-204	ENST00000479197	IFI27	P40305	119 aa	Predicted RBP	11.96	□□□□□ -0.49
RFK-204	ENST00000479197	DGAT2L7P	Q6IED9	249 aa		11.96	□□□□□ -0.49
RFK-204	ENST00000479197	CSDC2	Q9Y534	153 aa	Known RBP	11.96	□□□□□ -0.49
RFK-204	ENST00000479197	EREG	O14944	169 aa		11.96	□□□□□ -0.5
RFK-204	ENST00000479197	RPL39	P62891	51 aa	Known RBP	11.96	□□□□□ -0.5
RFK-204	ENST00000479197	TRAV8-4	A0A0B4J246	113 aa		11.95	□□□□□ -0.5
RFK-204	ENST00000479197	LRCOL1	A6NCL2	159 aa		11.95	□□□□□ -0.5
RFK-204	ENST00000479197	ORMDL2	Q53FV1	153 aa		11.95	□□□□□ -0.5
RFK-204	ENST00000479197	MAPKAPK5-AS1	Q8N8E1	139 aa		11.95	□□□□□ -0.5
RFK-204	ENST00000479197	TIMM21	Q9BVV7	248 aa		11.95	□□□□□ -0.5
RFK-204	ENST00000479197	CDC42SE2	Q9NRR3	84 aa		11.95	□□□□□ -0.5
RFK-204	ENST00000479197	IGKV3OR2-268	A0A0C4DH90	116 aa		11.94	□□□□□ -0.5
RFK-204	ENST00000479197	ZNF664	Q8N3J9	261 aa		11.94	□□□□□ -0.5
RFK-204	ENST00000479197	PRSS3P2	Q8NHM4	247 aa		11.94	□□□□□ -0.5
RFK-204	ENST00000479197	IGLV10-54	A0A075B6I4	117 aa		11.93	□□□□□ -0.5
RFK-204	ENST00000479197	SPANXA1	Q9NS26	97 aa		11.93	□□□□□ -0.5
RFK-204	ENST00000479197	KRTAP26-1	Q6PEX3	210 aa		11.91	□□□□□ -0.5
RFK-204	ENST00000479197	SPATA12	Q7Z6I5	190 aa		11.91	□□□□□ -0.5
RFK-204	ENST00000479197	BAALC	Q8WXS3	180 aa		11.91	□□□□□ -0.5
RFK-204	ENST00000479197	WFDC2	Q14508	124 aa		11.91	□□□□□ -0.5
RFK-204	ENST00000479197		Q6ZUT4	128 aa		11.91	□□□□□ -0.5
RFK-204	ENST00000479197	CYSLTR1	Q9Y271	337 aa		11.91	□□□□□ -0.5
RFK-204	ENST00000479197	LECT2	O14960	151 aa		11.9	□□□□□ -0.5
RFK-204	ENST00000479197	C2orf66	Q6UXQ4	117 aa		11.9	□□□□□ -0.5
RFK-204	ENST00000479197	C18orf32	Q8TCD1	76 aa		11.9	□□□□□ -0.5
RFK-204	ENST00000479197	DYNC1H1	Q14204	4646 aa	Known RBP	11.9	□□□□□ -0.51
RFK-204	ENST00000479197	LINC01546	A6NGU7	62 aa		11.89	□□□□□ -0.51
RFK-204	ENST00000479197	SCO1	O75880	301 aa		11.89	□□□□□ -0.51
RFK-204	ENST00000479197	KRTAP10-2	P60368	255 aa		11.89	□□□□□ -0.51
RFK-204	ENST00000479197	RNASE13	Q5GAN3	156 aa	Known RBP	11.89	□□□□□ -0.51
RFK-204	ENST00000479197	FA2H	Q7L5A8	372 aa		11.89	□□□□□ -0.51
RFK-204	ENST00000479197		Q8N814	137 aa		11.89	□□□□□ -0.51
RFK-204	ENST00000479197	PYGO1	Q9Y3Y4	419 aa		11.89	□□□□□ -0.51
RFK-204	ENST00000479197	DNAH5	Q8TE73	4624 aa		11.89	□□□□□ -0.51
RFK-204	ENST00000479197	LINC00959	A0A1B0GUT2	108 aa		11.88	□□□□□ -0.51
RFK-204	ENST00000479197	COLCA2	A8K830	154 aa		11.88	□□□□□ -0.51
RFK-204	ENST00000479197	G0S2	P27469	103 aa		11.88	□□□□□ -0.51
RFK-204	ENST00000479197	MRPS36	P82909	103 aa	Known RBP	11.88	□□□□□ -0.51
RFK-204	ENST00000479197	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.88	□□□□□ -0.51
RFK-204	ENST00000479197	BIRC6	Q9NR09	4857 aa		11.87	□□□□□ -0.51
RFK-204	ENST00000479197	FAM104A	Q969W3	186 aa		11.87	□□□□□ -0.51
RFK-204	ENST00000479197	SS18	Q15532	418 aa		11.86	□□□□□ -0.51
RFK-204	ENST00000479197	OPRPN	Q99935	248 aa	Predicted RBP	11.86	□□□□□ -0.51
RFK-204	ENST00000479197	PGPEP1	Q9NXJ5	209 aa		11.86	□□□□□ -0.51
RFK-204	ENST00000479197	GAGE12H	A6NDE8	117 aa		11.86	□□□□□ -0.51
RFK-204	ENST00000479197	TRGC2	P03986	189 aa		11.86	□□□□□ -0.51
RFK-204	ENST00000479197	IGLV4-3	A0A075B6K6	122 aa		11.85	□□□□□ -0.51
RFK-204	ENST00000479197	CCL25	O15444	150 aa		11.85	□□□□□ -0.51
RFK-204	ENST00000479197	XCL1	P47992	114 aa		11.85	□□□□□ -0.51
RFK-204	ENST00000479197	CDPF1	Q6NVV7	123 aa		11.85	□□□□□ -0.51
RFK-204	ENST00000479197	TOMM6	Q96B49	74 aa		11.85	□□□□□ -0.51
RFK-204	ENST00000479197	AP5S1	Q9NUS5	200 aa		11.85	□□□□□ -0.51
RFK-204	ENST00000479197	TRAV13-1	A0A0B4J241	112 aa		11.84	□□□□□ -0.51
RFK-204	ENST00000479197	C16orf90	A8MZG2	172 aa		11.84	□□□□□ -0.51
RFK-204	ENST00000479197	C1orf196	B1AJZ1	125 aa		11.84	□□□□□ -0.51
RFK-204	ENST00000479197	USP17L23	D6RBM5	183 aa		11.84	□□□□□ -0.51
RFK-204	ENST00000479197	LINC00614	P0C842	121 aa		11.84	□□□□□ -0.51
RFK-204	ENST00000479197	URB1-AS1	Q96HZ7	61 aa		11.84	□□□□□ -0.51
RFK-204	ENST00000479197	TMEM141	Q96I45	108 aa		11.84	□□□□□ -0.51
RFK-204	ENST00000479197	IGIP	A6NJ69	53 aa		11.83	□□□□□ -0.52
RFK-204	ENST00000479197	NPS	P0C0P6	89 aa		11.83	□□□□□ -0.52
RFK-204	ENST00000479197	S100A1	P23297	94 aa		11.83	□□□□□ -0.52
RFK-204	ENST00000479197	FUS	P35637	526 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
RFK-204	ENST00000479197	RAB5B	P61020	215 aa		11.83	□□□□□ -0.52
RFK-204	ENST00000479197	C14orf177	Q52M58	125 aa		11.83	□□□□□ -0.52
RFK-204	ENST00000479197	NTN5	Q8WTR8	489 aa	Predicted RBP	11.83	□□□□□ -0.52
RFK-204	ENST00000479197	LINC01549	A6NIU2	74 aa		11.82	□□□□□ -0.52
RFK-204	ENST00000479197	ATP6V1G1	O75348	118 aa		11.82	□□□□□ -0.52
RFK-204	ENST00000479197	FOXI1	Q12951	378 aa		11.82	□□□□□ -0.52
RFK-204	ENST00000479197	IFITM10	A6NMD0	228 aa		11.81	□□□□□ -0.52
RFK-204	ENST00000479197	CD164L2	Q6UWJ8	174 aa		11.81	□□□□□ -0.52
RFK-204	ENST00000479197		Q6ZN92	141 aa		11.81	□□□□□ -0.52
RFK-204	ENST00000479197	TIMM17A	Q99595	171 aa		11.81	□□□□□ -0.52
RFK-204	ENST00000479197	LRP1B	Q9NZR2	4599 aa		11.81	□□□□□ -0.52
RFK-204	ENST00000479197	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.81	□□□□□ -0.52
RFK-204	ENST00000479197	IGLV5-52	A0A0A0MRZ9	124 aa		11.81	□□□□□ -0.52
RFK-204	ENST00000479197	TEX43	Q6ZNM6	134 aa		11.81	□□□□□ -0.52
RFK-204	ENST00000479197	ERAS	Q7Z444	233 aa		11.8	□□□□□ -0.52
RFK-204	ENST00000479197	SCGB3A1	Q96QR1	104 aa		11.8	□□□□□ -0.52
RFK-204	ENST00000479197	PAPPA-AS1	Q5QFB9	102 aa		11.79	□□□□□ -0.52
RFK-204	ENST00000479197	AMELX	Q99217	191 aa		11.79	□□□□□ -0.52
RFK-204	ENST00000479197	C2orf88	Q9BSF0	95 aa		11.79	□□□□□ -0.52
RFK-204	ENST00000479197	VCX2	Q9H322	139 aa		11.79	□□□□□ -0.52
RFK-204	ENST00000479197	CFAP161	Q6P656	301 aa		11.78	□□□□□ -0.52
RFK-204	ENST00000479197		A0A096LNJ9	63 aa		11.77	□□□□□ -0.52
RFK-204	ENST00000479197	HBD	P02042	147 aa		11.77	□□□□□ -0.52
RFK-204	ENST00000479197	PRSS1	P07477	247 aa		11.77	□□□□□ -0.52
RFK-204	ENST00000479197	LINC00173	Q6ZV60	143 aa		11.77	□□□□□ -0.52
RFK-204	ENST00000479197	CHCHD1	Q96BP2	118 aa	Known RBP	11.77	□□□□□ -0.52
RFK-204	ENST00000479197	ZC2HC1B	Q5TFG8	222 aa		11.76	□□□□□ -0.53
RFK-204	ENST00000479197	BAGE3	Q86Y29	109 aa		11.76	□□□□□ -0.53
RFK-204	ENST00000479197	C15orf56	Q8N910	161 aa		11.76	□□□□□ -0.53
RFK-204	ENST00000479197	hDV102S1	A0JD36	115 aa		11.76	□□□□□ -0.53
RFK-204	ENST00000479197	COX7A2L	O14548	114 aa		11.76	□□□□□ -0.53
RFK-204	ENST00000479197	UBE2D1	P51668	147 aa		11.76	□□□□□ -0.53
RFK-204	ENST00000479197	PMCHL1	Q16048	86 aa		11.76	□□□□□ -0.53
RFK-204	ENST00000479197	GCSH	P23434	173 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms