RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 TMEM256Q8N2U0 113 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM75Q8N9X5 138 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 NUP35Q8NFH5 326 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 OR2K2Q8NGT1 345 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 C4orf3Q8WVX3 66 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 BAALCQ8WXS3 180 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BHQ93079 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 FXYD5Q96DB9 178 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 MRAP2Q96G30 205 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 RNF185Q96GF1 192 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 C14orf144Q96I85 54 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 FAM167A-AS1Q96KT0 104 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TIMM17AQ99595 171 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BNQ99877 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BMQ99879 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PMCHL2Q9BQD1 86 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PRADC1Q9BSG0 188 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM70Q9BUB7 260 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 AGPAT4-IT1Q9H0P7 198 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 C11orf68Q9H3H3 251 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 C11orf1Q9H5F2 150 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 NOP10Q9NPE3 64 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 NXT2Q9NPJ8 142 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 MRPL16Q9NX20 251 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 MRPL36Q9P0J6 103 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 MRPL27Q9P0M9 148 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM14CQ9P0S9 112 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TOMM7Q9P0U1 55 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 LY96Q9Y6Y9 160 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 V9GYY9 64 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 FBN1P35555 2871 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PLXNB1O43157 2135 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 COL6A3P12111 3177 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 ASH1LQ9NR48 2969 aaKnown RBP0.82□□□□□ -2.28
SRRM1-211ENST00000478890 PDZD2O15018 2839 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 TRBV24-1A0A075B6N3 115 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 IGHV3-64A0A075B6Q5 118 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 IGKV1D-37A0A075B6S9 117 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 A0A087WX48 190 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 A0A096LPF7 62 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV13-1A0A0B4J241 112 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 LOC107984156A0A0G2JMH3 177 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 A0A0J9YX75 114 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 A0A0J9YY99 117 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 LOC105371267A0A1B0GV96 52 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 SMIM27A0A1W2PRY6 76 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 PLAC8L1A1L4L8 177 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 CLPSL1A2RUU4 121 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 RBAKDNA6NC62 111 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 A6NDN8 102 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 A8MWP6 167 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 H3BRM9 83 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 M0R143 59 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 M0R2P5 195 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 LTAP01374 205 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 HBDP02042 147 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 PFN1P07737 140 aaKnown RBP0.82□□□□□ -2.28
SRRM1-211ENST00000478890 SMIM6P0DI80 62 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 ADCYAP1P18509 176 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 PLNP26678 52 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 DDTP30046 118 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 MYCNOSP40205 109 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 CTAG1AP78358 180 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 SLAQ13239 276 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 CIRBPQ14011 172 aaKnown RBP0.82□□□□□ -2.28
SRRM1-211ENST00000478890 DEFB114Q30KQ6 69 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 MRPL51Q4U2R6 128 aaKnown RBP0.82□□□□□ -2.28
SRRM1-211ENST00000478890 COL5A1-AS1Q5SY13 56 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 C10orf91Q5T1B1 145 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 FAM104BQ5XKR9 115 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 CEMP1Q6PRD7 247 aaPredicted RBP0.82□□□□□ -2.28
SRRM1-211ENST00000478890 RASL11AQ6T310 242 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 UNQ9165/PRO28630Q6UXU0 137 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 ZFP2Q6ZN57 461 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 FOXI2Q6ZQN5 318 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 ATP5L2Q7Z4Y8 100 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 NDUFA11Q86Y39 141 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 GPHB5Q86YW7 130 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 ARL17AQ8IVW1 177 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 UBE2DNLQ8IWF7 75 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 HIST3H2BBQ8N257 126 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM86BQ8N661 226 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 DEFB125Q8N687 156 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 Q8N6K4 173 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 LINC00469Q8N7U9 141 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 OR5A1Q8NGJ0 315 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 OR11H2Q8NH07 326 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 OR13C6PQ8NH95 151 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 PIFOQ8TCI5 191 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 RAB37Q96AX2 223 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 IFI27L1Q96BM0 104 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 CHCHD1Q96BP2 118 aaKnown RBP0.82□□□□□ -2.28
SRRM1-211ENST00000478890 SMIM12Q96EX1 92 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 IGF2BP2-AS1Q96M15 143 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BLQ99880 126 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 MIEN1Q9BRT3 115 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 C2orf88Q9BSF0 95 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM243Q9BU79 118 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 DPH3P1Q9H4G8 78 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM242Q9NWH2 141 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms