RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 OPRPNQ99935 248 aaPredicted RBP3.11□□□□□ -1.91
GPNMB-210ENST00000478451 TIMM21Q9BVV7 248 aa3.11□□□□□ -1.91
GPNMB-210ENST00000478451 SPANXDQ9BXN6 97 aa3.11□□□□□ -1.91
GPNMB-210ENST00000478451 RIF1Q5UIP0 2472 aaKnown RBP3.11□□□□□ -1.91
GPNMB-210ENST00000478451 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
GPNMB-210ENST00000478451 IGHV3OR16-10A0A075B7F0 116 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 A0A1W2PPR1 153 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 M0QY20 66 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 SLC25A20O43772 301 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 TIMM17BO60830 172 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 TCL1BO95988 128 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 SPINK8P0C7L1 97 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 CD28P10747 220 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 IFITM1P13164 125 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 PSMB8P28062 276 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 ATP5J2P56134 94 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 RPL39P62891 51 aaKnown RBP3.1□□□□□ -1.91
GPNMB-210ENST00000478451 CIRBPQ14011 172 aaKnown RBP3.1□□□□□ -1.91
GPNMB-210ENST00000478451 Q6ZQT7 251 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 KLHL30-AS1Q8NEE0 82 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 LINC01600Q96MT4 127 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 SPANXCQ9NY87 97 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 MUC6Q6W4X9 2439 aa3.1□□□□□ -1.91
GPNMB-210ENST00000478451 SMG1Q96Q15 3661 aaKnown RBP3.09□□□□□ -1.91
GPNMB-210ENST00000478451 ADGRG4Q8IZF6 3080 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 IGLV4-3A0A075B6K6 122 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 A0A0J9YXY3 114 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 TRBV30A0A0K0K1B3 111 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 TINCRA0A1B0GVN0 87 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 C9JAW5 83 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 H3BMM0 161 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 H3BT86 120 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 SNCGO76070 127 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 IGHV3-33P01772 117 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 ZNF22P17026 224 aaPredicted RBP3.09□□□□□ -1.91
GPNMB-210ENST00000478451 RPL13AP40429 203 aaKnown RBP3.09□□□□□ -1.91
GPNMB-210ENST00000478451 BLCAPP62952 87 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 MRPS36P82909 103 aaKnown RBP3.09□□□□□ -1.91
GPNMB-210ENST00000478451 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
GPNMB-210ENST00000478451 ZFAND6Q6FIF0 208 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 Q6ZUT4 128 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 ANKRD29Q8N6D5 301 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 TEX29Q8N6K0 151 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 ZNRF2Q8NHG8 242 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 TMEM263Q8WUH6 116 aaKnown RBP3.09□□□□□ -1.91
GPNMB-210ENST00000478451 UBE2WQ96B02 151 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 UBE2E2Q96LR5 201 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 FAM218AQ96MZ4 157 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 LINC00467Q9BRT7 94 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 GEMIN7Q9H840 131 aaKnown RBP3.09□□□□□ -1.91
GPNMB-210ENST00000478451 ASPMQ8IZT6 3477 aa3.09□□□□□ -1.91
GPNMB-210ENST00000478451 SPTBN1Q01082 2364 aaKnown RBP3.09□□□□□ -1.92
GPNMB-210ENST00000478451 HIVEP3Q5T1R4 2406 aa3.09□□□□□ -1.92
GPNMB-210ENST00000478451 NACAE9PAV3 2078 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.08□□□□□ -1.92
GPNMB-210ENST00000478451 IGHV1-58A0A0C4DH39 117 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 A0A0J9YXV3 536 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 TRBV10-2A0A0K0K1G8 114 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 A8MTW9 85 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 INSP01308 110 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 IGHV3-30-3P0DP02 117 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 EMP1P54849 157 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 TSPEAR-AS2P59090 65 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 MIAQ16674 131 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 SPINK13Q1W4C9 94 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 LINC01620Q4KN68 170 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 Q6ZRP5 223 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 MUSTN1Q8IVN3 82 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 AMELXQ99217 191 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 PRORYQ9H606 182 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 JPT2Q9H910 190 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 VPREB3Q9UKI3 123 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 SPTA1P02549 2419 aa3.08□□□□□ -1.92
GPNMB-210ENST00000478451 COL6A6A6NMZ7 2263 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 TRAV12-2A0A075B6T6 113 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 IGHV4-30-2A0A087WSY4 118 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 TRAV8-4A0A0B4J246 113 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 KRTAP16-1A8MUX0 517 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 C19orf84I3L1E1 186 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 ACYP1P07311 99 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 INSL3P51460 131 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 CMC4P56277 68 aaPredicted RBP3.07□□□□□ -1.92
GPNMB-210ENST00000478451 SYNJ2BPP57105 145 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 DEFB1P60022 68 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 HERVK_113P63121 156 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 LY6DQ14210 128 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 Q6Q795 121 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 SFTA2Q6UW10 78 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 DYNLRB2Q8TF09 96 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 VSIG2Q96IQ7 327 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 ANAPC13Q9BS18 74 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 PPDPFQ9H3Y8 114 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 NDUFA12Q9UI09 145 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 ICOSQ9Y6W8 199 aa3.07□□□□□ -1.92
GPNMB-210ENST00000478451 TRAV25A0A0B4J276 109 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 A0A0J9YWU9 116 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 FAM240AA0A1B0GVK7 77 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 H7C2G1 150 aa3.06□□□□□ -1.92
GPNMB-210ENST00000478451 NDUFA1O15239 70 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms