RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 COPZ2Q9P299 210 aa-0.36□□□□□ -2.47
SYCP3-205ENST00000478238 SVEP1Q4LDE5 3571 aa-0.36□□□□□ -2.47
SYCP3-205ENST00000478238 PHLPP1O60346 1717 aa-0.36□□□□□ -2.47
SYCP3-205ENST00000478238 APC2O95996 2303 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 UNC13AQ9UPW8 1703 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 ZFHX3Q15911 3703 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 TRAV13-2A0A0B4J235 113 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 SPAARA0A1B0GVQ0 90 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 SMCO1Q147U7 214 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 TMEM170BQ5T4T1 132 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 Q6JHZ5 121 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 TTC9CQ8N5M4 171 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 ANP32BQ92688 251 aaKnown RBP-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 LINC00472Q9H8W2 130 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 V9GYH0 126 aa-0.37□□□□□ -2.47
SYCP3-205ENST00000478238 MYOM3Q5VTT5 1437 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 LRP1BQ9NZR2 4599 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 ACANP16112 2415 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 LOC730098B7Z3J9 87 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 SPRR1BP22528 89 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 SPRR2BP35325 72 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 PIGYQ3MUY2 71 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 MAFIPQ8WZ33 124 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 AMELXQ99217 191 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 PDCD10Q9BUL8 212 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 TMEM191AQ9H0A3 160 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 LENEPQ9Y5L5 61 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 NBEAL1Q6ZS30 2694 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 SPTA1P02549 2419 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 PPIP5K1Q6PFW1 1433 aa-0.38□□□□□ -2.47
SYCP3-205ENST00000478238 RIMS1Q86UR5 1692 aaKnown RBP-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 WDR7Q9Y4E6 1490 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 TNFP01375 233 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 COX17Q14061 63 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 BAGE2Q86Y30 109 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 Q8N8P6 123 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 TSLPQ969D9 159 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 LSM10Q969L4 123 aaKnown RBP-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 TCEAL4Q96EI5 215 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 FXYD6Q9H0Q3 95 aa-0.39□□□□□ -2.47
SYCP3-205ENST00000478238 GRIN2AQ12879 1464 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 PIGBOS1A0A0B4J2F0 54 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 LOC105371267A0A1B0GV96 52 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 F8VRH5 84 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 UQCR11O14957 56 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 COX6B1P14854 86 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 Q6AWC8 147 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 NDUFA4L2Q9NRX3 87 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 CCDC167Q9P0B6 97 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 ARHGEF12Q9NZN5 1544 aa-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 PRKDCP78527 4128 aaKnown RBP-0.4□□□□□ -2.47
SYCP3-205ENST00000478238 CFTRP13569 1480 aa-0.41□□□□□ -2.47
SYCP3-205ENST00000478238 FLGP20930 4061 aaPredicted RBP-0.41□□□□□ -2.47
SYCP3-205ENST00000478238 IGLC7A0M8Q6 106 aa-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 APOC3P02656 99 aa-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 ARPC4P59998 168 aa-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 C12orf73Q69YU5 71 aa-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 SERP1Q9Y6X1 66 aa-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 EP300Q09472 2414 aaPredicted RBP-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 ROBO1Q9Y6N7 1651 aa-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 BICRAQ9NZM4 1560 aa-0.41□□□□□ -2.48
SYCP3-205ENST00000478238 RAPGEF6Q8TEU7 1601 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 CHD8Q9HCK8 2581 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 GOLGA4Q13439 2230 aaKnown RBP-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 CNOT1A5YKK6 2376 aaKnown RBP-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 TRBV7-3A0A075B6L6 115 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 HMGN4O00479 90 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 TPPP2P59282 170 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 KLK9Q2XQG4 91 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 COPS9Q8WXC6 57 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 PFDN5Q99471 154 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 MGST2Q99735 147 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 RERGLQ9H628 205 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 DYNLRB1Q9NP97 96 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 LINC01558Q9Y6Z2 57 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 ARHGEF5Q12774 1597 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 FMN2Q9NZ56 1722 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 LAMA5O15230 3695 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 SHROOM2Q13796 1616 aa-0.42□□□□□ -2.48
SYCP3-205ENST00000478238 STAB2Q8WWQ8 2551 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 MYOM1P52179 1685 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 MEIG1Q5JSS6 88 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 DEFB123Q8N688 67 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 URB1O60287 2271 aaKnown RBP-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 POLA1P09884 1462 aaPredicted RBP-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 SHANK2Q9UPX8 1470 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 NF1P21359 2839 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 TET3O43151 1660 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 SCN7AQ01118 1682 aa-0.43□□□□□ -2.48
SYCP3-205ENST00000478238 TGP01266 2768 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 CPSF1Q10570 1443 aaKnown RBP-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 NSD3Q9BZ95 1437 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 MIF4GDA9UHW6 222 aaKnown RBP-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 FAM25AB3EWG3 89 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 FAM25CB3EWG5 89 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 FAM25GB3EWG6 89 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 M0R2T5 61 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 GNG7O60262 68 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 SPINK4O60575 86 aa-0.44□□□□□ -2.48
SYCP3-205ENST00000478238 SFT2D2O95562 160 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms