RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 A0A1B0GUV1 79 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 ESDP10768 282 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 REG3AQ06141 175 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 SVBPQ8N300 66 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 BAALCQ8WXS3 180 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 KIR2DL4Q99706 377 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
HDAC6-222ENST00000478095 TRAV9-1A0A075B6T8 112 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 LOC389332A0A1B0GUA5 103 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 PHOX2AO14813 284 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 TCAPO15273 167 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 SNAPINO95295 136 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 HLA-DQA1P01909 254 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 MIAQ16674 131 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 KIAA1644Q3SXP7 199 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
HDAC6-222ENST00000478095 H7C423 109 aa6.79□□□□□ -1.32
HDAC6-222ENST00000478095 RPL32P62910 135 aaKnown RBP6.79□□□□□ -1.32
HDAC6-222ENST00000478095 Q8N814 137 aa6.79□□□□□ -1.32
HDAC6-222ENST00000478095 TMEM101Q96IK0 257 aa6.79□□□□□ -1.32
HDAC6-222ENST00000478095 TGIF2-C20orf24A0A0A6YYL0 155 aa6.78□□□□□ -1.32
HDAC6-222ENST00000478095 ZNF25P17030 456 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-222ENST00000478095 OR5A1Q8NGJ0 315 aa6.78□□□□□ -1.32
HDAC6-222ENST00000478095 MAP1LC3AQ9H492 121 aa6.78□□□□□ -1.32
HDAC6-222ENST00000478095 KIAA1109Q2LD37 5005 aa6.77□□□□□ -1.32
HDAC6-222ENST00000478095 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-222ENST00000478095 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
HDAC6-222ENST00000478095 RNASE13Q5GAN3 156 aaKnown RBP6.77□□□□□ -1.33
HDAC6-222ENST00000478095 KRTAP26-1Q6PEX3 210 aa6.77□□□□□ -1.33
HDAC6-222ENST00000478095 MRPL52Q86TS9 123 aaKnown RBP6.77□□□□□ -1.33
HDAC6-222ENST00000478095 LAMTOR2Q9Y2Q5 125 aa6.77□□□□□ -1.33
HDAC6-222ENST00000478095 UBE2D4Q9Y2X8 147 aa6.77□□□□□ -1.33
HDAC6-222ENST00000478095 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 TRAV8-4A0A0B4J246 113 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 RAB5AP20339 215 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 DGAT2L7PQ6IED9 249 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 GNB1LQ9BYB4 327 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
HDAC6-222ENST00000478095 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
HDAC6-222ENST00000478095 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
HDAC6-222ENST00000478095 USP17L23D6RBM5 183 aa6.75□□□□□ -1.33
HDAC6-222ENST00000478095 FABP9Q0Z7S8 132 aa6.75□□□□□ -1.33
HDAC6-222ENST00000478095 Q6ZUT4 128 aa6.75□□□□□ -1.33
HDAC6-222ENST00000478095 TMEM18Q96B42 140 aa6.75□□□□□ -1.33
HDAC6-222ENST00000478095 MT-ND6P03923 174 aa6.74□□□□□ -1.33
HDAC6-222ENST00000478095 IFI27P40305 119 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-222ENST00000478095 KRTAP10-1P60331 282 aa6.74□□□□□ -1.33
HDAC6-222ENST00000478095 COX19Q49B96 90 aa6.74□□□□□ -1.33
HDAC6-222ENST00000478095 CBLN2Q8IUK8 224 aa6.74□□□□□ -1.33
HDAC6-222ENST00000478095 ZNF664Q8N3J9 261 aa6.74□□□□□ -1.33
HDAC6-222ENST00000478095 Q8N8P6 123 aa6.74□□□□□ -1.33
HDAC6-222ENST00000478095 NTN5Q8WTR8 489 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-222ENST00000478095 CHCHD10Q8WYQ3 142 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-222ENST00000478095 HERC2O95714 4834 aa6.73□□□□□ -1.33
HDAC6-222ENST00000478095 LINC00959A0A1B0GUT2 108 aa6.73□□□□□ -1.33
HDAC6-222ENST00000478095 GCSHP23434 173 aa6.73□□□□□ -1.33
HDAC6-222ENST00000478095 XCL1P47992 114 aa6.73□□□□□ -1.33
HDAC6-222ENST00000478095 OPRPNQ99935 248 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-222ENST00000478095 ALKBH7Q9BT30 221 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-222ENST00000478095 CSDC2Q9Y534 153 aaKnown RBP6.73□□□□□ -1.33
HDAC6-222ENST00000478095 TRAPPC1Q9Y5R8 145 aa6.73□□□□□ -1.33
HDAC6-222ENST00000478095 TRAV13-1A0A0B4J241 112 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 CCL25O15444 150 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 SMAGPQ0VAQ4 97 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 FAM104AQ969W3 186 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 YPEL4Q96NS1 127 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 TIMM21Q9BVV7 248 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 NXT2Q9NPJ8 142 aaKnown RBP6.72□□□□□ -1.33
HDAC6-222ENST00000478095 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 RYR1P21817 5038 aa6.72□□□□□ -1.33
HDAC6-222ENST00000478095 PRSS1P07477 247 aa6.71□□□□□ -1.34
HDAC6-222ENST00000478095 FOXI1Q12951 378 aa6.71□□□□□ -1.34
HDAC6-222ENST00000478095 SS18Q15532 418 aa6.71□□□□□ -1.34
HDAC6-222ENST00000478095 C14orf177Q52M58 125 aa6.71□□□□□ -1.34
HDAC6-222ENST00000478095 ORMDL2Q53FV1 153 aa6.71□□□□□ -1.34
HDAC6-222ENST00000478095 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.34
HDAC6-222ENST00000478095 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
HDAC6-222ENST00000478095 HAMPP81172 84 aa6.7□□□□□ -1.34
HDAC6-222ENST00000478095 HIGD2BQ4VC39 106 aa6.7□□□□□ -1.34
HDAC6-222ENST00000478095 SMCO4Q9NRQ5 59 aa6.7□□□□□ -1.34
HDAC6-222ENST00000478095 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
HDAC6-222ENST00000478095 APOBP04114 4563 aaKnown RBP6.69□□□□□ -1.34
HDAC6-222ENST00000478095 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
HDAC6-222ENST00000478095 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
HDAC6-222ENST00000478095 IFITM10A6NMD0 228 aa6.69□□□□□ -1.34
HDAC6-222ENST00000478095 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
HDAC6-222ENST00000478095 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
HDAC6-222ENST00000478095 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
HDAC6-222ENST00000478095 C1orf196B1AJZ1 125 aa6.68□□□□□ -1.34
HDAC6-222ENST00000478095 K7EMI3 77 aa6.68□□□□□ -1.34
HDAC6-222ENST00000478095 CDK2AP2O75956 126 aa6.68□□□□□ -1.34
HDAC6-222ENST00000478095 ZC2HC1BQ5TFG8 222 aa6.68□□□□□ -1.34
HDAC6-222ENST00000478095 CD164L2Q6UWJ8 174 aa6.68□□□□□ -1.34
HDAC6-222ENST00000478095 PYGO1Q9Y3Y4 419 aa6.68□□□□□ -1.34
HDAC6-222ENST00000478095 CFAP161Q6P656 301 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms