RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 PYGO1Q9Y3Y4 419 aa13.34□□□□□ -0.27
ACTB-210ENST00000477812 FAT2Q9NYQ8 4349 aa13.33□□□□□ -0.27
ACTB-210ENST00000477812 LINC00310P59036 64 aa13.33□□□□□ -0.28
ACTB-210ENST00000477812 REG3AQ06141 175 aa13.33□□□□□ -0.28
ACTB-210ENST00000477812 SMAGPQ0VAQ4 97 aa13.33□□□□□ -0.28
ACTB-210ENST00000477812 Q6ZUT4 128 aa13.33□□□□□ -0.28
ACTB-210ENST00000477812 TOMM6Q96B49 74 aa13.33□□□□□ -0.28
ACTB-210ENST00000477812 TMEM101Q96IK0 257 aa13.33□□□□□ -0.28
ACTB-210ENST00000477812 IGIPA6NJ69 53 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BKO60814 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BJP06899 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BOP23527 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BBP33778 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BDP58876 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 RAB5BP61020 215 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BCP62807 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 MRPS36P82909 103 aaKnown RBP13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST2H2BEQ16778 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.32□□□□□ -0.28
ACTB-210ENST00000477812 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 ZNF664Q8N3J9 261 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BHQ93079 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BNQ99877 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 HIST1H2BMQ99879 126 aa13.32□□□□□ -0.28
ACTB-210ENST00000477812 CRPP02741 224 aa13.31□□□□□ -0.28
ACTB-210ENST00000477812 G0S2P27469 103 aa13.31□□□□□ -0.28
ACTB-210ENST00000477812 MIAQ16674 131 aa13.31□□□□□ -0.28
ACTB-210ENST00000477812 CHCHD1Q96BP2 118 aaKnown RBP13.31□□□□□ -0.28
ACTB-210ENST00000477812 OPRPNQ99935 248 aaPredicted RBP13.31□□□□□ -0.28
ACTB-210ENST00000477812 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
ACTB-210ENST00000477812 IGLV4-3A0A075B6K6 122 aa13.29□□□□□ -0.28
ACTB-210ENST00000477812 KRTAP26-1Q6PEX3 210 aa13.29□□□□□ -0.28
ACTB-210ENST00000477812 BAGE3Q86Y29 109 aa13.29□□□□□ -0.28
ACTB-210ENST00000477812 NPSP0C0P6 89 aa13.28□□□□□ -0.28
ACTB-210ENST00000477812 PMCHL1Q16048 86 aa13.28□□□□□ -0.28
ACTB-210ENST00000477812 RNASE13Q5GAN3 156 aaKnown RBP13.28□□□□□ -0.28
ACTB-210ENST00000477812 SERF1AO75920 110 aa13.27□□□□□ -0.29
ACTB-210ENST00000477812 TIMM17AQ99595 171 aa13.27□□□□□ -0.29
ACTB-210ENST00000477812 LINC01549A6NIU2 74 aa13.26□□□□□ -0.29
ACTB-210ENST00000477812 HBDP02042 147 aa13.26□□□□□ -0.29
ACTB-210ENST00000477812 PDZD11Q5EBL8 140 aa13.26□□□□□ -0.29
ACTB-210ENST00000477812 ERASQ7Z444 233 aa13.26□□□□□ -0.29
ACTB-210ENST00000477812 MAPKAPK5-AS1Q8N8E1 139 aa13.26□□□□□ -0.29
ACTB-210ENST00000477812 RMI2Q96E14 147 aa13.26□□□□□ -0.29
ACTB-210ENST00000477812 C1orf43Q9BWL3 253 aa13.26□□□□□ -0.29
ACTB-210ENST00000477812 IGKV2D-24A0A075B6R9 120 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 TRAV8-4A0A0B4J246 113 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 IGKV3OR2-268A0A0C4DH90 116 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 LINC00959A0A1B0GUT2 108 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 NUPR1O60356 82 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 LINC00173Q6ZV60 143 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 TMEM141Q96I45 108 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 TM2D2Q9BX73 214 aa13.25□□□□□ -0.29
ACTB-210ENST00000477812 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
ACTB-210ENST00000477812 C1orf196B1AJZ1 125 aa13.24□□□□□ -0.29
ACTB-210ENST00000477812 SCGB3A1Q96QR1 104 aa13.24□□□□□ -0.29
ACTB-210ENST00000477812 AMELXQ99217 191 aa13.24□□□□□ -0.29
ACTB-210ENST00000477812 COX11Q9Y6N1 276 aa13.24□□□□□ -0.29
ACTB-210ENST00000477812 TNP2Q05952 138 aa13.23□□□□□ -0.29
ACTB-210ENST00000477812 LINC00336Q6ZUF6 198 aa13.23□□□□□ -0.29
ACTB-210ENST00000477812 HSBP1O75506 76 aa13.22□□□□□ -0.29
ACTB-210ENST00000477812 COA6Q5JTJ3 125 aaKnown RBP13.22□□□□□ -0.29
ACTB-210ENST00000477812 ZC2HC1BQ5TFG8 222 aa13.22□□□□□ -0.29
ACTB-210ENST00000477812 CHCHD10Q8WYQ3 142 aaPredicted RBP13.22□□□□□ -0.29
ACTB-210ENST00000477812 LRCOL1A6NCL2 159 aa13.21□□□□□ -0.29
ACTB-210ENST00000477812 FAM19A2Q8N3H0 131 aa13.21□□□□□ -0.29
ACTB-210ENST00000477812 TRAV13-1A0A0B4J241 112 aa13.2□□□□□ -0.3
ACTB-210ENST00000477812 PRSS29PA6NIE9 313 aa13.2□□□□□ -0.3
ACTB-210ENST00000477812 IFITM10A6NMD0 228 aa13.2□□□□□ -0.3
ACTB-210ENST00000477812 Q6ZN92 141 aa13.2□□□□□ -0.3
ACTB-210ENST00000477812 TEX43Q6ZNM6 134 aa13.2□□□□□ -0.3
ACTB-210ENST00000477812 DNAH11Q96DT5 4516 aa13.19□□□□□ -0.3
ACTB-210ENST00000477812 CCL25O15444 150 aa13.19□□□□□ -0.3
ACTB-210ENST00000477812 PSCAO43653 123 aa13.19□□□□□ -0.3
ACTB-210ENST00000477812 WFDC2Q14508 124 aa13.19□□□□□ -0.3
ACTB-210ENST00000477812 VCX2Q9H322 139 aa13.19□□□□□ -0.3
ACTB-210ENST00000477812 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.18□□□□□ -0.3
ACTB-210ENST00000477812 UBE2D1P51668 147 aa13.18□□□□□ -0.3
ACTB-210ENST00000477812 FOXI1Q12951 378 aa13.18□□□□□ -0.3
ACTB-210ENST00000477812 SS18Q15532 418 aa13.18□□□□□ -0.3
ACTB-210ENST00000477812 PAPPA-AS1Q5QFB9 102 aa13.18□□□□□ -0.3
ACTB-210ENST00000477812 BAALCQ8WXS3 180 aa13.18□□□□□ -0.3
ACTB-210ENST00000477812 A0A087WTM6 91 aa13.17□□□□□ -0.3
ACTB-210ENST00000477812 GAGE12HA6NDE8 117 aa13.17□□□□□ -0.3
ACTB-210ENST00000477812 XCL1P47992 114 aa13.17□□□□□ -0.3
ACTB-210ENST00000477812 ATP5LO75964 103 aa13.16□□□□□ -0.3
ACTB-210ENST00000477812 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
ACTB-210ENST00000477812 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
ACTB-210ENST00000477812 PKD1P98161 4303 aa13.16□□□□□ -0.3
ACTB-210ENST00000477812 A0A1B0GVY2 172 aa13.15□□□□□ -0.3
ACTB-210ENST00000477812 LINC00242Q5T6M2 205 aa13.15□□□□□ -0.3
ACTB-210ENST00000477812 CST9LQ9H4G1 147 aa13.15□□□□□ -0.3
ACTB-210ENST00000477812 NDUFA6P56556 154 aa13.14□□□□□ -0.31
ACTB-210ENST00000477812 FAM19A3Q7Z5A8 133 aa13.14□□□□□ -0.31
ACTB-210ENST00000477812 HECTD4Q9Y4D8 3996 aa13.14□□□□□ -0.31
ACTB-210ENST00000477812 IGHV3OR16-9A0A0B4J2B5 98 aa13.13□□□□□ -0.31
ACTB-210ENST00000477812 LECT2O14960 151 aa13.13□□□□□ -0.31
ACTB-210ENST00000477812 PMVKQ15126 192 aa13.13□□□□□ -0.31
ACTB-210ENST00000477812 IFI27L1Q96BM0 104 aa13.13□□□□□ -0.31
ACTB-210ENST00000477812 USP17L23D6RBM5 183 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms