RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 IGHV7-81A0A0B4J1V7 117 aa9.31□□□□□ -0.92
RTFDC1-207ENST00000477573 FAM110DQ8TAY7 271 aaPredicted RBP9.31□□□□□ -0.92
RTFDC1-207ENST00000477573 ABCA2Q9BZC7 2435 aa9.31□□□□□ -0.92
RTFDC1-207ENST00000477573 NDPQ00604 133 aa9.31□□□□□ -0.92
RTFDC1-207ENST00000477573 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
RTFDC1-207ENST00000477573 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
RTFDC1-207ENST00000477573 Q8TAT8 98 aa9.3□□□□□ -0.92
RTFDC1-207ENST00000477573 UTP20O75691 2785 aaKnown RBP9.3□□□□□ -0.92
RTFDC1-207ENST00000477573 TRAV7A0A075B6U4 112 aa9.3□□□□□ -0.92
RTFDC1-207ENST00000477573 IGKV3D-20A0A0C4DH25 116 aa9.3□□□□□ -0.92
RTFDC1-207ENST00000477573 IGKV1-17P01599 117 aa9.3□□□□□ -0.92
RTFDC1-207ENST00000477573 NXPH4O95158 308 aa9.29□□□□□ -0.92
RTFDC1-207ENST00000477573 LINC00474Q9P2X8 69 aa9.29□□□□□ -0.92
RTFDC1-207ENST00000477573 MOB4Q9Y3A3 225 aa9.29□□□□□ -0.92
RTFDC1-207ENST00000477573 CRYBG3Q68DQ2 2970 aa9.29□□□□□ -0.92
RTFDC1-207ENST00000477573 TRBV10-3A0A0K0K1G6 114 aa9.29□□□□□ -0.92
RTFDC1-207ENST00000477573 RBM3P98179 157 aaKnown RBP9.29□□□□□ -0.92
RTFDC1-207ENST00000477573 ANKRD17O75179 2603 aaKnown RBP9.29□□□□□ -0.92
RTFDC1-207ENST00000477573 SNRPD3P62318 126 aaKnown RBP9.28□□□□□ -0.92
RTFDC1-207ENST00000477573 SS18Q15532 418 aa9.28□□□□□ -0.92
RTFDC1-207ENST00000477573 BRD3OSQ6XYD6 125 aa9.28□□□□□ -0.92
RTFDC1-207ENST00000477573 LINC00846Q9NV44 126 aa9.28□□□□□ -0.92
RTFDC1-207ENST00000477573 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.92
RTFDC1-207ENST00000477573 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.92
RTFDC1-207ENST00000477573 STHQ8IWL8 128 aa9.27□□□□□ -0.92
RTFDC1-207ENST00000477573 C5orf56Q8N8D9 126 aa9.27□□□□□ -0.92
RTFDC1-207ENST00000477573 LINC01356Q8N9X3 169 aa9.27□□□□□ -0.92
RTFDC1-207ENST00000477573 TRAV12-3A0A0B4J271 114 aa9.27□□□□□ -0.93
RTFDC1-207ENST00000477573 ECSCRQ19T08 205 aa9.27□□□□□ -0.93
RTFDC1-207ENST00000477573 VPS13CQ709C8 3753 aa9.27□□□□□ -0.93
RTFDC1-207ENST00000477573 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 IGHV4-38-2P0DP08 117 aa9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 RPL39LQ96EH5 51 aaKnown RBP9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 OBSCN-AS1Q96MR7 158 aa9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.26□□□□□ -0.939e-8■■■■■ 29.1
RTFDC1-207ENST00000477573 MAP1AP78559 2803 aaPredicted RBP9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 CENPEQ02224 2701 aa9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 KLK9Q2XQG4 91 aa9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 OVOL2Q9BRP0 275 aa9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
RTFDC1-207ENST00000477573 Q6ZSV7 163 aa9.25□□□□□ -0.93
RTFDC1-207ENST00000477573 TRAV13-2A0A0B4J235 113 aa9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 IBA57-AS1B1ANH7 110 aa9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 PRB4P10163 310 aaPredicted RBP9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 RPL28P46779 137 aaKnown RBP9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 SVEP1Q4LDE5 3571 aa9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 PAX4O43316 350 aa9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 ZFAND3Q9H8U3 227 aa9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 S4R3C0 116 aa9.24□□□□□ -0.93
RTFDC1-207ENST00000477573 USP9YO00507 2555 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 TRBV12-3P01733 135 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 C11orf21Q9P2W6 132 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 PTPN13Q12923 2485 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 CELSR2Q9HCU4 2923 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 IGHV4OR15-8A0A075B7B6 117 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 A0A087WW49 117 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 F8W735 103 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 DEFB113Q30KQ7 82 aa9.23□□□□□ -0.93
RTFDC1-207ENST00000477573 F8WEM9 126 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 H3BUX3 64 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 VCYO14598 125 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 CTSGP08311 255 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 GPHB5Q86YW7 130 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 A0A096LNT2 108 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 A6NDX4 124 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 G3V318 75 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 IGHV3-23P01764 117 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 Q8N2B8 174 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
RTFDC1-207ENST00000477573 NAV2Q8IVL1 2488 aa9.21□□□□□ -0.93
RTFDC1-207ENST00000477573 BLCAPP62952 87 aa9.21□□□□□ -0.94
RTFDC1-207ENST00000477573 LY6EQ16553 131 aa9.21□□□□□ -0.94
RTFDC1-207ENST00000477573 POLQO75417 2590 aa9.21□□□□□ -0.94
RTFDC1-207ENST00000477573 IGF1P05019 195 aa9.2□□□□□ -0.94
RTFDC1-207ENST00000477573 MED14OSP0DP75 135 aa9.2□□□□□ -0.94
RTFDC1-207ENST00000477573 RPL39P62891 51 aaKnown RBP9.2□□□□□ -0.94
RTFDC1-207ENST00000477573 U3KQE9 123 aa9.2□□□□□ -0.94
RTFDC1-207ENST00000477573 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
RTFDC1-207ENST00000477573 HILS1P60008 231 aa9.2□□□□□ -0.94
RTFDC1-207ENST00000477573 IGHV3-64A0A075B6Q5 118 aa9.19□□□□□ -0.94
RTFDC1-207ENST00000477573 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
RTFDC1-207ENST00000477573 ABCA12Q86UK0 2595 aa9.19□□□□□ -0.94
RTFDC1-207ENST00000477573 H3BUA1 57 aa9.19□□□□□ -0.94
RTFDC1-207ENST00000477573 SOCS3O14543 225 aa9.19□□□□□ -0.94
RTFDC1-207ENST00000477573 C19orf54Q5BKX5 351 aa9.19□□□□□ -0.94
RTFDC1-207ENST00000477573 CHD6Q8TD26 2715 aa9.19□□□□□ -0.94
RTFDC1-207ENST00000477573 FBN2P35556 2912 aa9.18□□□□□ -0.94
RTFDC1-207ENST00000477573 CLEC19AQ6UXS0 136 aa9.18□□□□□ -0.94
RTFDC1-207ENST00000477573 C14orf132Q9NPU4 83 aa9.18□□□□□ -0.94
RTFDC1-207ENST00000477573 CSPG4Q6UVK1 2322 aa9.18□□□□□ -0.94
RTFDC1-207ENST00000477573 CSMD1Q96PZ7 3565 aa9.17□□□□□ -0.94
RTFDC1-207ENST00000477573 MGPP08493 103 aa9.17□□□□□ -0.94
RTFDC1-207ENST00000477573 CCDC140Q96MF4 163 aa9.17□□□□□ -0.94
RTFDC1-207ENST00000477573 CREBBPQ92793 2442 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms