RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	C17orf77	Q96MU5	243 aa		3.47	□□□□□ -1.85
PTCD3-212	ENST00000477520	GAFA1	Q96PS6	74 aa		3.47	□□□□□ -1.85
PTCD3-212	ENST00000477520	BEX4	Q9NWD9	120 aa	Predicted RBP	3.47	□□□□□ -1.85
PTCD3-212	ENST00000477520	UBE2D4	Q9Y2X8	147 aa		3.47	□□□□□ -1.85
PTCD3-212	ENST00000477520	CENPE	Q02224	2701 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	IGHV3OR16-10	A0A075B7F0	116 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	TRAV13-2	A0A0B4J235	113 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	IGHV1-3	A0A0C4DH29	117 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	SOCS3	O14543	225 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	GAS8-AS1	O95177	125 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	TRGV3	P03979	118 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	S100A4	P26447	101 aa	Known RBP	3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	RNASE4	P34096	147 aa	Known RBP	3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	TSPEAR-AS2	P59090	65 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	CD164	Q04900	197 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	MRGPRG-AS1	Q2M3A8	158 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	KLK9	Q2XQG4	91 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	LYPD5	Q6UWN5	251 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	GPHB5	Q86YW7	130 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	C14orf178	Q8N769	122 aa	Predicted RBP	3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	LY6G5B	Q8NDX9	201 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	LEAP2	Q969E1	77 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	LITAF	Q99732	161 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	KLK9	Q9UKQ9	250 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	PHLDA3	Q9Y5J5	127 aa		3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	GCN1	Q92616	2671 aa	Known RBP	3.46	□□□□□ -1.86
PTCD3-212	ENST00000477520	ADGRG4	Q8IZF6	3080 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	IGLV3-9	A0A075B6K5	115 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	TRBV7-6	A0A0J9YX20	115 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520		H3BQ85	93 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	TMEM178B	H3BS89	294 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520		M0R1B8	84 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	ENSA	O43768	121 aa	Known RBP	3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	ERC2-IT1	O76042	136 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	OXT	P01178	125 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	TSHB	P01222	138 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	IGHV3-48	P01763	117 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	IGHV3-30-3	P0DP02	117 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	LOX	P28300	417 aa	Predicted RBP	3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	RPL28	P46779	137 aa	Known RBP	3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	XCL1	P47992	114 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	PMAIP1	Q13794	54 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	C10orf55	Q5SWW7	151 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	HIST2H2BC	Q6DN03	193 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	HIST2H2BD	Q6DRA6	164 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	C9orf139	Q6ZV77	190 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	RNF152	Q8N8N0	203 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	C10orf105	Q8TEF2	133 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	CLEC2B	Q92478	149 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	XCL2	Q9UBD3	114 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	NDUFA12	Q9UI09	145 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	COL12A1	Q99715	3063 aa		3.45	□□□□□ -1.86
PTCD3-212	ENST00000477520	CACNA1D	Q01668	2161 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520		H7BZZ5	65 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	NDUFA1	O15239	70 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	NDUFB3	O43676	98 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520		Q6ZRU5	148 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	PRR15	Q8IV56	129 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	LINC01561	Q8N1V8	128 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	FAM110D	Q8TAY7	271 aa	Predicted RBP	3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	LINC01560	Q8TB33	94 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	DYNLRB2	Q8TF09	96 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	EEF1AKMT3	Q96AZ1	226 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	SIRPD	Q9H106	197 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	C16orf95	Q9H693	158 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	KAAG1	Q9UBP8	84 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	CTSZ	Q9UBR2	303 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	PKIG	Q9Y2B9	76 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	FLNB	O75369	2602 aa	Known RBP	3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	DSCAM	O60469	2012 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	BSN	Q9UPA5	3926 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	NOTCH2	Q04721	2471 aa		3.44	□□□□□ -1.86
PTCD3-212	ENST00000477520	ABCA12	Q86UK0	2595 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	IGLV11-55	A0A075B6I3	123 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	PLAC8L1	A1L4L8	177 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	LYRM9	A8MSI8	78 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	CCK	P06307	115 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	BSPH1	Q075Z2	132 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	C20orf203	Q8NBC4	194 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	NPB	Q8NG41	125 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520		Q8TAT8	98 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	UBL5	Q9BZL1	73 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	SMAD5-AS1	Q9Y6J3	95 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	KIF25-AS1	Q9Y6Z4	181 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	TENM4	Q6N022	2769 aa		3.43	□□□□□ -1.86
PTCD3-212	ENST00000477520	HECTD1	Q9ULT8	2610 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	ARFGEF3	Q5TH69	2177 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	NAV2	Q8IVL1	2488 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520		A0A0U1RQV1	116 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520		M0R1W7	72 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	MGP	P08493	103 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	IGHV1-8	P0DP01	117 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	PDE6G	P18545	87 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	BLCAP	P62952	87 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	BRK1	Q8WUW1	75 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	RPL39L	Q96EH5	51 aa	Known RBP	3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	BAHCC1	Q9P281	2608 aa		3.42	□□□□□ -1.86
PTCD3-212	ENST00000477520	ANKRD17	O75179	2603 aa	Known RBP	3.41	□□□□□ -1.86

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