RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SMAGPQ0VAQ4 97 aa8.19□□□□□ -1.1
CLCNKA-205ENST00000477360 GAGE6Q13070 117 aa8.19□□□□□ -1.1
CLCNKA-205ENST00000477360 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
CLCNKA-205ENST00000477360 C20orf203Q8NBC4 194 aa8.18□□□□□ -1.1
CLCNKA-205ENST00000477360 C18orf32Q8TCD1 76 aa8.18□□□□□ -1.1
CLCNKA-205ENST00000477360 LRP1BQ9NZR2 4599 aa8.18□□□□□ -1.1
CLCNKA-205ENST00000477360 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
CLCNKA-205ENST00000477360 HERC2O95714 4834 aa8.17□□□□□ -1.1
CLCNKA-205ENST00000477360 FCER1GP30273 86 aa8.17□□□□□ -1.1
CLCNKA-205ENST00000477360 REG3AQ06141 175 aa8.17□□□□□ -1.1
CLCNKA-205ENST00000477360 MRPL52Q86TS9 123 aaKnown RBP8.17□□□□□ -1.1
CLCNKA-205ENST00000477360 MAPKAPK5-AS1Q8N8E1 139 aa8.17□□□□□ -1.1
CLCNKA-205ENST00000477360 CSDC2Q9Y534 153 aaKnown RBP8.17□□□□□ -1.1
CLCNKA-205ENST00000477360 GCSHP23434 173 aa8.16□□□□□ -1.1
CLCNKA-205ENST00000477360 IFI27P40305 119 aaPredicted RBP8.16□□□□□ -1.1
CLCNKA-205ENST00000477360 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
CLCNKA-205ENST00000477360 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
CLCNKA-205ENST00000477360 LOC389332A0A1B0GUA5 103 aa8.15□□□□□ -1.1
CLCNKA-205ENST00000477360 AMMECR1LQ6DCA0 310 aa8.15□□□□□ -1.1
CLCNKA-205ENST00000477360 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.1
CLCNKA-205ENST00000477360 PRSS3P2Q8NHM4 247 aa8.15□□□□□ -1.1
CLCNKA-205ENST00000477360 TMEM18Q96B42 140 aa8.15□□□□□ -1.1
CLCNKA-205ENST00000477360 TIMM21Q9BVV7 248 aa8.15□□□□□ -1.1
CLCNKA-205ENST00000477360 DNAH5Q8TE73 4624 aa8.15□□□□□ -1.11
CLCNKA-205ENST00000477360 IGLV4-60A0A075B6I1 120 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 LINC01549A6NIU2 74 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 CCL25O15444 150 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 FGF6P10767 208 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 G0S2P27469 103 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 RAB5BP61020 215 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 BAALCQ8WXS3 180 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 TMEM101Q96IK0 257 aa8.14□□□□□ -1.11
CLCNKA-205ENST00000477360 URB1-AS1Q96HZ7 61 aa8.13□□□□□ -1.11
CLCNKA-205ENST00000477360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 IGKV2-29A2NJV5 120 aaPredicted RBP8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 LINC00614P0C842 121 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 WFDC2Q14508 124 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 DGAT2L7PQ6IED9 249 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 FA2HQ7L5A8 372 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 OR5A1Q8NGJ0 315 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 DEFB104AQ8WTQ1 72 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 AP5S1Q9NUS5 200 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 PYGO1Q9Y3Y4 419 aa8.12□□□□□ -1.11
CLCNKA-205ENST00000477360 NPSP0C0P6 89 aa8.11□□□□□ -1.11
CLCNKA-205ENST00000477360 RNASEKQ6P5S7 137 aaKnown RBP8.11□□□□□ -1.11
CLCNKA-205ENST00000477360 CHCHD1Q96BP2 118 aaKnown RBP8.11□□□□□ -1.11
CLCNKA-205ENST00000477360 SPANXA1Q9NS26 97 aa8.11□□□□□ -1.11
CLCNKA-205ENST00000477360 UBE2D4Q9Y2X8 147 aa8.11□□□□□ -1.11
CLCNKA-205ENST00000477360 RYR1P21817 5038 aa8.11□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BKO60814 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BJP06899 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BOP23527 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BBP33778 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BDP58876 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BCP62807 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST2H2BEQ16778 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 CFAP161Q6P656 301 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 C2orf66Q6UXQ4 117 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BHQ93079 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BNQ99877 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 HIST1H2BMQ99879 126 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 CYSLTR1Q9Y271 337 aa8.1□□□□□ -1.11
CLCNKA-205ENST00000477360 C1orf196B1AJZ1 125 aa8.09□□□□□ -1.11
CLCNKA-205ENST00000477360 USP17L23D6RBM5 183 aa8.09□□□□□ -1.11
CLCNKA-205ENST00000477360 RPL39P62891 51 aaKnown RBP8.09□□□□□ -1.11
CLCNKA-205ENST00000477360 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
CLCNKA-205ENST00000477360 Q6ZSA8 131 aa8.09□□□□□ -1.11
CLCNKA-205ENST00000477360 ZNF664Q8N3J9 261 aa8.09□□□□□ -1.11
CLCNKA-205ENST00000477360 TOMM6Q96B49 74 aa8.09□□□□□ -1.11
CLCNKA-205ENST00000477360 HSPG2P98160 4391 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 A0A096LNJ9 63 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 LECT2O14960 151 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 LINC00310P59036 64 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 CNBPP62633 177 aaKnown RBP8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 COA6Q5JTJ3 125 aaKnown RBP8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 CLPSL2Q6UWE3 100 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 BAGE3Q86Y29 109 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 Q8N1X5 172 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 TIMM17AQ99595 171 aa8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
CLCNKA-205ENST00000477360 XGP55808 180 aa8.07□□□□□ -1.12
CLCNKA-205ENST00000477360 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
CLCNKA-205ENST00000477360 IGLV10-54A0A075B6I4 117 aa8.06□□□□□ -1.12
CLCNKA-205ENST00000477360 LINC00959A0A1B0GUT2 108 aa8.06□□□□□ -1.12
CLCNKA-205ENST00000477360 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
CLCNKA-205ENST00000477360 HBDP02042 147 aa8.06□□□□□ -1.12
CLCNKA-205ENST00000477360 SS18Q15532 418 aa8.06□□□□□ -1.12
CLCNKA-205ENST00000477360 ERASQ7Z444 233 aa8.06□□□□□ -1.12
CLCNKA-205ENST00000477360 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
CLCNKA-205ENST00000477360 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 HSBP1O75506 76 aa8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 SERF1AO75920 110 aa8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 PRSS1P07477 247 aa8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 PAPPA-AS1Q5QFB9 102 aa8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 CD164L2Q6UWJ8 174 aa8.05□□□□□ -1.12
CLCNKA-205ENST00000477360 C9orf163Q8N9P6 203 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms