RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 LYZL1Q6UWQ5 148 aa7.46□□□□□ -1.22
VARS2-208ENST00000477052 MRPL52Q86TS9 123 aaKnown RBP7.46□□□□□ -1.22
VARS2-208ENST00000477052 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
VARS2-208ENST00000477052 IGKV3OR2-268A0A0C4DH90 116 aa7.45□□□□□ -1.22
VARS2-208ENST00000477052 FOXA3P55318 350 aaPredicted RBP7.45□□□□□ -1.22
VARS2-208ENST00000477052 PYY3Q5JQD4 70 aa7.45□□□□□ -1.22
VARS2-208ENST00000477052 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
VARS2-208ENST00000477052 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
VARS2-208ENST00000477052 TMEM243Q9BU79 118 aa7.45□□□□□ -1.22
VARS2-208ENST00000477052 V9GYV3 84 aa7.45□□□□□ -1.22
VARS2-208ENST00000477052 TRAV26-2A0A0B4J265 109 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 NTF3P20783 257 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 HIST3H2BBQ8N257 126 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 TSKUQ8WUA8 353 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 GTSF1Q8WW33 167 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 C14orf144Q96I85 54 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 PACRGQ96M98 296 aaPredicted RBP7.44□□□□□ -1.22
VARS2-208ENST00000477052 YPEL4Q96NS1 127 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 PLA2G2DQ9UNK4 145 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 CBY1Q9Y3M2 126 aa7.44□□□□□ -1.22
VARS2-208ENST00000477052 TRBV24-1A0A075B6N3 115 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 H7C1H1 209 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BKO60814 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BJP06899 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 TRGC1P0CF51 173 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BOP23527 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BBP33778 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BDP58876 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BCP62807 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST2H2BEQ16778 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BHQ93079 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 TMEM18Q96B42 140 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BNQ99877 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 HIST1H2BMQ99879 126 aa7.43□□□□□ -1.22
VARS2-208ENST00000477052 GAGE12HA6NDE8 117 aa7.42□□□□□ -1.22
VARS2-208ENST00000477052 FABP4P15090 132 aa7.42□□□□□ -1.22
VARS2-208ENST00000477052 AMTP48728 403 aa7.42□□□□□ -1.22
VARS2-208ENST00000477052 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
VARS2-208ENST00000477052 RPL39LQ96EH5 51 aaKnown RBP7.42□□□□□ -1.22
VARS2-208ENST00000477052 DPH3P1Q9H4G8 78 aa7.42□□□□□ -1.22
VARS2-208ENST00000477052 IGHV3-64A0A075B6Q5 118 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 A0A087WYN8 130 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 HIGD1CA8MV81 97 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 UBE2L6O14933 153 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 TCAPO15273 167 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 TRGC2P03986 189 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 MT1HL1P0DM35 61 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 CNBPP62633 177 aaKnown RBP7.41□□□□□ -1.22
VARS2-208ENST00000477052 COTL1Q14019 142 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 TWIST1Q15672 202 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 HIGD2BQ4VC39 106 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 C15orf56Q8N910 161 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 BORCS7Q96B45 105 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 ANAPC16Q96DE5 110 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 PGLYRP4Q96LB8 373 aa7.41□□□□□ -1.22
VARS2-208ENST00000477052 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.4□□□□□ -1.22
VARS2-208ENST00000477052 TRAV8-4A0A0B4J246 113 aa7.4□□□□□ -1.22
VARS2-208ENST00000477052 A0A1B0GUV1 79 aa7.4□□□□□ -1.22
VARS2-208ENST00000477052 A0A1B0GV90 55 aa7.4□□□□□ -1.22
VARS2-208ENST00000477052 SMIM27A0A1W2PRY6 76 aa7.4□□□□□ -1.22
VARS2-208ENST00000477052 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.22
VARS2-208ENST00000477052 M0R143 59 aa7.4□□□□□ -1.22
VARS2-208ENST00000477052 CIRBPQ14011 172 aaKnown RBP7.4□□□□□ -1.22
VARS2-208ENST00000477052 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.22
VARS2-208ENST00000477052 A0A1B0GUT8 65 aa7.39□□□□□ -1.23
VARS2-208ENST00000477052 ODF1Q14990 250 aa7.39□□□□□ -1.23
VARS2-208ENST00000477052 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
VARS2-208ENST00000477052 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
VARS2-208ENST00000477052 SPACA4Q8TDM5 124 aa7.39□□□□□ -1.23
VARS2-208ENST00000477052 NAT8BQ9UHF3 227 aa7.39□□□□□ -1.23
VARS2-208ENST00000477052 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
VARS2-208ENST00000477052 PHOX2AO14813 284 aa7.38□□□□□ -1.23
VARS2-208ENST00000477052 COX6A2Q02221 97 aa7.38□□□□□ -1.23
VARS2-208ENST00000477052 SMIM15Q7Z3B0 74 aa7.38□□□□□ -1.23
VARS2-208ENST00000477052 PRSS3P2Q8NHM4 247 aa7.38□□□□□ -1.23
VARS2-208ENST00000477052 HIST1H2BLQ99880 126 aa7.38□□□□□ -1.23
VARS2-208ENST00000477052 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.37□□□□□ -1.23
VARS2-208ENST00000477052 IGKV2-24A0A0C4DH68 120 aa7.37□□□□□ -1.23
VARS2-208ENST00000477052 GAS8-AS1O95177 125 aa7.37□□□□□ -1.23
VARS2-208ENST00000477052 RIGQ13278 110 aa7.37□□□□□ -1.23
VARS2-208ENST00000477052 RNASEKQ6P5S7 137 aaKnown RBP7.37□□□□□ -1.23
VARS2-208ENST00000477052 CHCHD10Q8WYQ3 142 aaPredicted RBP7.37□□□□□ -1.23
VARS2-208ENST00000477052 IFITM10A6NMD0 228 aa7.36□□□□□ -1.23
VARS2-208ENST00000477052 MAJINQ3KP22 176 aa7.36□□□□□ -1.23
VARS2-208ENST00000477052 AMMECR1LQ6DCA0 310 aa7.36□□□□□ -1.23
VARS2-208ENST00000477052 LINC00526Q96FQ7 95 aa7.36□□□□□ -1.23
VARS2-208ENST00000477052 IMMP2LQ96T52 175 aa7.36□□□□□ -1.23
VARS2-208ENST00000477052 TMEM191AQ9H0A3 160 aa7.36□□□□□ -1.23
VARS2-208ENST00000477052 A0A1B0GW15 77 aa7.35□□□□□ -1.23
VARS2-208ENST00000477052 FGF6P10767 208 aa7.35□□□□□ -1.23
VARS2-208ENST00000477052 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
VARS2-208ENST00000477052 PRO1933Q9H354 126 aa7.35□□□□□ -1.23
VARS2-208ENST00000477052 PLAC8Q9NZF1 115 aa7.35□□□□□ -1.23
VARS2-208ENST00000477052 SDHAF1A6NFY7 115 aa7.34□□□□□ -1.23
VARS2-208ENST00000477052 LINC00614P0C842 121 aa7.34□□□□□ -1.23
VARS2-208ENST00000477052 XCL1P47992 114 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms