RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 IGFL3Q6UXB1 125 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 C16orf47Q6ZP98 133 aaPredicted RBP2.4□□□□□ -2.03
ITGA4-208ENST00000476824 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 ZFAND2AQ8N6M9 145 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 LINC01006Q8NI28 216 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 TMEM141Q96I45 108 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 LINC00467Q9BRT7 94 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 NHP2Q9NX24 153 aaKnown RBP2.4□□□□□ -2.03
ITGA4-208ENST00000476824 ANKHD1Q8IWZ3 2542 aaKnown RBP2.4□□□□□ -2.03
ITGA4-208ENST00000476824 LRP4O75096 1905 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 EXPH5Q8NEV8 1989 aa2.4□□□□□ -2.03
ITGA4-208ENST00000476824 TACC2O95359 2948 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 VPS13CQ709C8 3753 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 IGLV1-50A0A075B6I6 118 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 IGLV3-9A0A075B6K5 115 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV3-21A0A0B4J1V1 117 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV7-4-1A0A0J9YVY3 117 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 J3QKU1 62 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 NPYP01303 97 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 IL4P05112 153 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 SLC25A16P16260 332 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 CMC4P56277 68 aaPredicted RBP2.39□□□□□ -2.03
ITGA4-208ENST00000476824 KLKP1Q107X0 134 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 ESRGQ1W209 222 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 SDIM1Q6ZPB5 146 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 LINC00269Q8N2A0 174 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 RPRMLQ8N4K4 120 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 PFN4Q8NHR9 129 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 SMIM7Q9BQ49 75 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 FAM103A1Q9BTL3 118 aaKnown RBP2.39□□□□□ -2.03
ITGA4-208ENST00000476824 CHCHD7Q9BUK0 85 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 NMES1Q9C002 83 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 CYP4F30PQ9H0H9 118 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 C11orf1Q9H5F2 150 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 LINC00474Q9P2X8 69 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 MED13LQ71F56 2210 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 ARHGAP21Q5T5U3 1957 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 MED13Q9UHV7 2174 aa2.39□□□□□ -2.03
ITGA4-208ENST00000476824 NUMA1Q14980 2115 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 CUBNO60494 3623 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV3-49A0A0A0MS15 119 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV3-66A0A0C4DH42 116 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 A0A1B0GVX0 72 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 A0A1B0GWA3 101 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 C17orf51A8MQB3 221 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 H7BZZ5 65 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 GNRH2O43555 120 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 CPSF4O95639 269 aaKnown RBP2.38□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV1-69P01742 117 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 CCL3P10147 92 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 GCHFRP30047 84 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 XCL1P47992 114 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 MIAQ16674 131 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 RNASE13Q5GAN3 156 aaKnown RBP2.38□□□□□ -2.03
ITGA4-208ENST00000476824 S100A7L2Q5SY68 101 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 LYPD5Q6UWN5 251 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 C15orf56Q8N910 161 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 CNEP1R1Q8N9A8 125 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 SMIM4Q8WVI0 70 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 PPP1R1CQ8WVI7 109 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 GABARAPL1Q9H0R8 117 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 HILPDAQ9Y5L2 63 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 NBEAL1Q6ZS30 2694 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 DCHS2Q6V1P9 2916 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 ATRQ13535 2644 aa2.38□□□□□ -2.03
ITGA4-208ENST00000476824 IGKV1D-17A0A075B6S4 117 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 LOC107984156A0A0G2JMH3 177 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV5-10-1A0A0J9YXX1 117 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 MYMXA0A1B0GTQ4 84 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 C2orf70A6NJV1 201 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 SLC25A20O43772 301 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 IGLV3-25P01717 112 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 PRB2P02812 416 aaPredicted RBP2.37□□□□□ -2.03
ITGA4-208ENST00000476824 TLX1NBP0CAT3 122 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 CD52P31358 61 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 SSBP1Q04837 148 aaKnown RBP2.37□□□□□ -2.03
ITGA4-208ENST00000476824 SYCNQ0VAF6 134 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 IL17AQ16552 155 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 ARL17AQ8IVW1 177 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 IFI27L1Q96BM0 104 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 RETNLBQ9BQ08 111 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 TTTY13Q9BZ97 58 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 NDUFA12Q9UI09 145 aa2.37□□□□□ -2.03
ITGA4-208ENST00000476824 BAZ2BQ9UIF8 2168 aaKnown RBP2.37□□□□□ -2.03
ITGA4-208ENST00000476824 PRRC2CQ9Y520 2896 aaKnown RBP2.37□□□□□ -2.03
ITGA4-208ENST00000476824 NYNRINQ9P2P1 1898 aaKnown RBP2.37□□□□□ -2.03
ITGA4-208ENST00000476824 CCDC168Q8NDH2 2452 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 STAB1Q9NY15 2570 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 DSCAMO60469 2012 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV5-51A0A0C4DH38 117 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 hDV103S1A0JD37 113 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 PINLYPA6NC86 204 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 H3BMM0 161 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms