RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-223ENST00000476135 ISOC2Q96AB3 205 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 SFRP2Q96HF1 295 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 OSTCQ9NRP0 149 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 IGHV3-73A0A0B4J1V6 119 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 FAM231BA6NCW3 169 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 H7C1H1 209 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 GZMBP10144 247 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 ZNF56Q15929 161 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 PRR4Q16378 134 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 LYZL1Q6UWQ5 148 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 Q75L30 129 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 ERASQ7Z444 233 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 COMMD7Q86VX2 200 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 NIT1Q86X76 327 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 OR10G8Q8NGN5 311 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 TSKUQ8WUA8 353 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 UBE2WQ96B02 151 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 GFRA4Q9GZZ7 299 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 KLK12Q9UKR0 248 aa4.45□□□□□ -1.7
HDAC9-223ENST00000476135 A0A087WWC5 75 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 TRAV26-2A0A0B4J265 109 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 MUC21A0A0G2JKD1 596 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 PPP1R2P9O14990 202 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 Q0VG73 95 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 ELOBQ15370 118 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 UFSP1Q6NVU6 142 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 JPT2Q9H910 190 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 PSORS1C2Q9UIG4 136 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 URGCP-MRPS24S4R325 110 aa4.44□□□□□ -1.7
HDAC9-223ENST00000476135 TRBV10-1A0A0K0K1A3 114 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 LINC00862A6NCI5 91 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 PCP4L1A6NKN8 68 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 HIGD1CA8MV81 97 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 F8W036 122 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 MGPP08493 103 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 RAB4BP61018 213 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 RPL36AP83881 106 aaKnown RBP4.43□□□□□ -1.7
HDAC9-223ENST00000476135 TWIST1Q15672 202 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 ZNF664Q8N3J9 261 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 C14orf178Q8N769 122 aaPredicted RBP4.43□□□□□ -1.7
HDAC9-223ENST00000476135 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.43□□□□□ -1.7
HDAC9-223ENST00000476135 GTSF1Q8WW33 167 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
HDAC9-223ENST00000476135 PGLYRP4Q96LB8 373 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 CHCHD7Q9BUK0 85 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 SAMD10Q9BYL1 202 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 NAT8BQ9UHF3 227 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 V9GYV3 84 aa4.43□□□□□ -1.7
HDAC9-223ENST00000476135 IGHV3-64A0A075B6Q5 118 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 A0A1B0GUT8 65 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 A0A1B0GW15 77 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 TMEM218A2RU14 115 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 GAGE12JA6NER3 117 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 MT-ND4LP03901 98 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 CHTF8P0CG12 524 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 NTF3P20783 257 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 FOXA3P55318 350 aaPredicted RBP4.42□□□□□ -1.7
HDAC9-223ENST00000476135 CNBPP62633 177 aaKnown RBP4.42□□□□□ -1.7
HDAC9-223ENST00000476135 HERV-K104P63124 156 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 GAGE1Q13065 139 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 GAGE4Q13068 117 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 GAGE5Q13069 117 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 RIGQ13278 110 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 SEC11CQ9BY50 192 aa4.42□□□□□ -1.7
HDAC9-223ENST00000476135 SMIM27A0A1W2PRY6 76 aa4.41□□□□□ -1.7
HDAC9-223ENST00000476135 S100A8P05109 93 aa4.41□□□□□ -1.7
HDAC9-223ENST00000476135 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
HDAC9-223ENST00000476135 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
HDAC9-223ENST00000476135 NDUFA5Q16718 116 aa4.41□□□□□ -1.7
HDAC9-223ENST00000476135 TRBV7-3A0A075B6L6 115 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 HLA-DQA1P01909 254 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 ADCYAP1P18509 176 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 TMEM97Q5BJF2 176 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 SUMO4Q6EEV6 95 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 ATP5L2Q7Z4Y8 100 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 NUP35Q8NFH5 326 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 TMEM191AQ9H0A3 160 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 PAM16Q9Y3D7 125 aa4.4□□□□□ -1.71
HDAC9-223ENST00000476135 A0A087WX48 190 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 UBE2D3P61077 147 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 PKIAP61925 76 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 UBE2D2P62837 147 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 HBBP68871 147 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 RHEBQ15382 184 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 ENHOQ6UWT2 76 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 Q8N9P0 234 aaPredicted RBP4.39□□□□□ -1.71
HDAC9-223ENST00000476135 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
HDAC9-223ENST00000476135 ALKBH7Q9BT30 221 aaPredicted RBP4.39□□□□□ -1.71
HDAC9-223ENST00000476135 CARHSP1Q9Y2V2 147 aaKnown RBP4.39□□□□□ -1.71
HDAC9-223ENST00000476135 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.38□□□□□ -1.71
HDAC9-223ENST00000476135 M0QY20 66 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 PPP1R17O96001 155 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 CRPP02741 224 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 S100PP25815 95 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms