RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 C5orf38Q86SI9 138 aa12.86□□□□□ -0.35
CCM2-207ENST00000475551 DNAJC30Q96LL9 226 aa12.86□□□□□ -0.35
CCM2-207ENST00000475551 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
CCM2-207ENST00000475551 USP9YO00507 2555 aaPredicted RBP12.86□□□□□ -0.35
CCM2-207ENST00000475551 ZFHX3Q15911 3703 aa12.85□□□□□ -0.35
CCM2-207ENST00000475551 IGLV5-39A0A0G2JS06 123 aa12.85□□□□□ -0.35
CCM2-207ENST00000475551 RBMY1A1P0DJD3 496 aaKnown RBP12.85□□□□□ -0.35
CCM2-207ENST00000475551 RBMY1CP0DJD4 496 aa12.85□□□□□ -0.35
CCM2-207ENST00000475551 RBMY1FQ15415 496 aaKnown RBP12.85□□□□□ -0.35
CCM2-207ENST00000475551 Q9H8V8 135 aa12.85□□□□□ -0.35
CCM2-207ENST00000475551 Q9UF83 564 aa12.85□□□□□ -0.35
CCM2-207ENST00000475551 BAALC-AS2P0C853 105 aa12.84□□□□□ -0.35
CCM2-207ENST00000475551 LINC00694P0DN24 101 aa12.84□□□□□ -0.35
CCM2-207ENST00000475551 IGHV4-38-2P0DP08 117 aa12.84□□□□□ -0.35
CCM2-207ENST00000475551 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
CCM2-207ENST00000475551 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.84□□□□□ -0.35
CCM2-207ENST00000475551 Q6ZSN1 163 aa12.84□□□□□ -0.35
CCM2-207ENST00000475551 NRGNQ92686 78 aa12.84□□□□□ -0.35
CCM2-207ENST00000475551 DOPEY2Q9Y3R5 2298 aa12.84□□□□□ -0.35
CCM2-207ENST00000475551 Q8N2B8 174 aa12.83□□□□□ -0.36
CCM2-207ENST00000475551 ASH1LQ9NR48 2969 aaKnown RBP12.83□□□□□ -0.36
CCM2-207ENST00000475551 PSMB8P28062 276 aa12.83□□□□□ -0.36
CCM2-207ENST00000475551 C22orf24Q9Y442 160 aa12.83□□□□□ -0.36
CCM2-207ENST00000475551 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
CCM2-207ENST00000475551 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
CCM2-207ENST00000475551 HERVK_113P63121 156 aa12.82□□□□□ -0.36
CCM2-207ENST00000475551 COX6A2Q02221 97 aa12.82□□□□□ -0.36
CCM2-207ENST00000475551 CELSR2Q9HCU4 2923 aa12.82□□□□□ -0.36
CCM2-207ENST00000475551 INAFM2P0DMQ5 153 aa12.81□□□□□ -0.36
CCM2-207ENST00000475551 HTN1P15515 57 aa12.81□□□□□ -0.36
CCM2-207ENST00000475551 FBN2P35556 2912 aa12.8□□□□□ -0.36
CCM2-207ENST00000475551 COX7CP15954 63 aa12.8□□□□□ -0.36
CCM2-207ENST00000475551 IGHV3OR16-12A0A075B7B8 117 aa12.79□□□□□ -0.36
CCM2-207ENST00000475551 IGHV3-53P01767 116 aa12.79□□□□□ -0.36
CCM2-207ENST00000475551 FAM19A3Q7Z5A8 133 aa12.79□□□□□ -0.36
CCM2-207ENST00000475551 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
CCM2-207ENST00000475551 IGHV3-38A0A0C4DH36 116 aa12.79□□□□□ -0.36
CCM2-207ENST00000475551 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
CCM2-207ENST00000475551 DGAT2L7PQ6IED9 249 aa12.79□□□□□ -0.36
CCM2-207ENST00000475551 HIST1H4AP62805 103 aaKnown RBP12.78□□□□□ -0.36
CCM2-207ENST00000475551 ZNF415Q09FC8 603 aa12.78□□□□□ -0.36
CCM2-207ENST00000475551 FAM218AQ96MZ4 157 aa12.78□□□□□ -0.36
CCM2-207ENST00000475551 A0A0U1RRA0 63 aa12.78□□□□□ -0.36
CCM2-207ENST00000475551 A0A1B0GX51 115 aa12.78□□□□□ -0.36
CCM2-207ENST00000475551 KRTAP10-9P60411 292 aa12.78□□□□□ -0.36
CCM2-207ENST00000475551 LRRC75A-AS1Q8N1F1 130 aa12.78□□□□□ -0.36
CCM2-207ENST00000475551 C2orf48Q96LS8 159 aa12.78□□□□□ -0.36
CCM2-207ENST00000475551 FASNP49327 2511 aaKnown RBP12.77□□□□□ -0.36
CCM2-207ENST00000475551 NBPF19A0A087WUL8 3843 aa12.77□□□□□ -0.36
CCM2-207ENST00000475551 A8MTW9 85 aa12.77□□□□□ -0.37
CCM2-207ENST00000475551 SMIM1B2RUZ4 78 aa12.77□□□□□ -0.37
CCM2-207ENST00000475551 CRYGAP11844 174 aa12.77□□□□□ -0.37
CCM2-207ENST00000475551 CSMD2Q7Z408 3487 aa12.76□□□□□ -0.37
CCM2-207ENST00000475551 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
CCM2-207ENST00000475551 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
CCM2-207ENST00000475551 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
CCM2-207ENST00000475551 CCL19Q99731 98 aa12.76□□□□□ -0.37
CCM2-207ENST00000475551 IGHV4-61A0A0C4DH41 118 aa12.75□□□□□ -0.37
CCM2-207ENST00000475551 ATOX1O00244 68 aa12.75□□□□□ -0.37
CCM2-207ENST00000475551 HIST2H2BDQ6DRA6 164 aa12.75□□□□□ -0.37
CCM2-207ENST00000475551 GAGE2AQ6NT46 116 aa12.75□□□□□ -0.37
CCM2-207ENST00000475551 PRIMA1Q86XR5 153 aa12.75□□□□□ -0.37
CCM2-207ENST00000475551 PF4P02776 101 aa12.74□□□□□ -0.37
CCM2-207ENST00000475551 MALP21145 153 aa12.74□□□□□ -0.37
CCM2-207ENST00000475551 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
CCM2-207ENST00000475551 ABCA2Q9BZC7 2435 aa12.74□□□□□ -0.37
CCM2-207ENST00000475551 CENPEQ02224 2701 aa12.74□□□□□ -0.37
CCM2-207ENST00000475551 J3KT08 172 aa12.74□□□□□ -0.37
CCM2-207ENST00000475551 PRM2P04554 102 aa12.74□□□□□ -0.37
CCM2-207ENST00000475551 AKAP6Q13023 2319 aa12.74□□□□□ -0.37
CCM2-207ENST00000475551 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
CCM2-207ENST00000475551 C10orf99Q6UWK7 81 aa12.73□□□□□ -0.37
CCM2-207ENST00000475551 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
CCM2-207ENST00000475551 PIMREGQ9BSJ6 248 aa12.72□□□□□ -0.37
CCM2-207ENST00000475551 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
CCM2-207ENST00000475551 TRAV13-2A0A0B4J235 113 aa12.72□□□□□ -0.37
CCM2-207ENST00000475551 RS1O15537 224 aa12.72□□□□□ -0.37
CCM2-207ENST00000475551 C11orf72Q8NBR9 251 aa12.71□□□□□ -0.37
CCM2-207ENST00000475551 RBMY1BA6NDE4 496 aaKnown RBP12.71□□□□□ -0.37
CCM2-207ENST00000475551 RBMY1EA6NEQ0 496 aaKnown RBP12.71□□□□□ -0.37
CCM2-207ENST00000475551 RBMY1DP0C7P1 496 aaKnown RBP12.71□□□□□ -0.37
CCM2-207ENST00000475551 RPS28P62857 69 aaKnown RBP12.71□□□□□ -0.37
CCM2-207ENST00000475551 OVOL2Q9BRP0 275 aa12.71□□□□□ -0.37
CCM2-207ENST00000475551 DEFB131AP59861 70 aa12.7□□□□□ -0.38
CCM2-207ENST00000475551 Q9HAA7 133 aa12.7□□□□□ -0.38
CCM2-207ENST00000475551 F5H768 121 aa12.7□□□□□ -0.38
CCM2-207ENST00000475551 PTPN13Q12923 2485 aa12.7□□□□□ -0.38
CCM2-207ENST00000475551 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
CCM2-207ENST00000475551 RPL18AQ02543 176 aaKnown RBP12.68□□□□□ -0.38
CCM2-207ENST00000475551 TRAV13-1A0A0B4J241 112 aa12.67□□□□□ -0.38
CCM2-207ENST00000475551 CRPP02741 224 aa12.67□□□□□ -0.38
CCM2-207ENST00000475551 C10orf105Q8TEF2 133 aa12.67□□□□□ -0.38
CCM2-207ENST00000475551 DNAL4O96015 105 aa12.67□□□□□ -0.38
CCM2-207ENST00000475551 ATP5J2P56134 94 aa12.67□□□□□ -0.38
CCM2-207ENST00000475551 APCP25054 2843 aa12.67□□□□□ -0.38
CCM2-207ENST00000475551 VPS13CQ709C8 3753 aa12.66□□□□□ -0.38
CCM2-207ENST00000475551 C5orf47Q569G3 176 aa12.66□□□□□ -0.38
CCM2-207ENST00000475551 FAM19A5Q7Z5A7 132 aaPredicted RBP12.66□□□□□ -0.38
CCM2-207ENST00000475551 SPG11Q96JI7 2443 aa12.66□□□□□ -0.38
CCM2-207ENST00000475551 Q6JHZ5 121 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms