RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 WFDC10AQ9H1F0 79 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 TEX49A0A1B0GTD5 131 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
VAPB-204ENST00000475243 A0A0J9YWU9 116 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 Q6ZSV7 163 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 LY6G6DO95868 133 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 CRIP1P50238 77 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 CFAP126Q5VTH2 177 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 H3BT86 120 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 SVIPQ8NHG7 77 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 PTPRSQ13332 1948 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 A0A1B0GXF2 115 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 HRCT1Q6UXD1 115 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 G3V4G9 280 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 SPANXCQ9NY87 97 aa8.19□□□□□ -1.1
VAPB-204ENST00000475243 LRP4O75096 1905 aa8.18□□□□□ -1.1
VAPB-204ENST00000475243 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
VAPB-204ENST00000475243 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
VAPB-204ENST00000475243 P0C879 139 aa8.18□□□□□ -1.1
VAPB-204ENST00000475243 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
VAPB-204ENST00000475243 TRBV6-8A0A0A6YYG3 113 aa8.18□□□□□ -1.1
VAPB-204ENST00000475243 BBC3Q96PG8 261 aaPredicted RBP8.18□□□□□ -1.1
VAPB-204ENST00000475243 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
VAPB-204ENST00000475243 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
VAPB-204ENST00000475243 A8MZ25 164 aa8.17□□□□□ -1.1
VAPB-204ENST00000475243 LRRC75A-AS1Q8N1F1 130 aa8.17□□□□□ -1.1
VAPB-204ENST00000475243 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 ODF3Q96PU9 254 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 Q6ZS46 218 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 NDUFC2O95298 119 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 IGLC6P0CF74 106 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 BRK1Q8WUW1 75 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.16□□□□□ -1.1
VAPB-204ENST00000475243 LINC00574Q9H8X3 128 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 TMEM223A0PJW6 202 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 ZFAND3Q9H8U3 227 aa8.16□□□□□ -1.1
VAPB-204ENST00000475243 C3orf84H3BNL1 204 aa8.15□□□□□ -1.1
VAPB-204ENST00000475243 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.1
VAPB-204ENST00000475243 M0QY20 66 aa8.15□□□□□ -1.1
VAPB-204ENST00000475243 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
VAPB-204ENST00000475243 MAPKAPK5-AS1Q8N8E1 139 aa8.15□□□□□ -1.1
VAPB-204ENST00000475243 MLST8Q9BVC4 326 aa8.15□□□□□ -1.1
VAPB-204ENST00000475243 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.11
VAPB-204ENST00000475243 PDE6GP18545 87 aa8.14□□□□□ -1.11
VAPB-204ENST00000475243 ENHOQ6UWT2 76 aa8.14□□□□□ -1.11
VAPB-204ENST00000475243 MYO9AB2RTY4 2548 aa8.14□□□□□ -1.11
VAPB-204ENST00000475243 LY6LH3BQJ8 138 aa8.14□□□□□ -1.11
VAPB-204ENST00000475243 MIFP14174 115 aa8.14□□□□□ -1.11
VAPB-204ENST00000475243 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
VAPB-204ENST00000475243 COL5A1P20908 1838 aaPredicted RBP8.14□□□□□ -1.11
VAPB-204ENST00000475243 J3KT08 172 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 IGF2RP11717 2491 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 LRRK2Q5S007 2527 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 LINC00308Q8TCZ7 52 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 CLUHP3Q96NS8 147 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 CRIP3Q6Q6R5 217 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 C11orf71Q6IPW1 123 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 LY6G6CO95867 125 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 KPRPQ5T749 579 aaPredicted RBP8.13□□□□□ -1.11
VAPB-204ENST00000475243 C20orf197Q8N268 126 aa8.13□□□□□ -1.11
VAPB-204ENST00000475243 EIF4EBP1Q13541 118 aaPredicted RBP8.12□□□□□ -1.11
VAPB-204ENST00000475243 C6orf99Q4VX62 202 aa8.12□□□□□ -1.11
VAPB-204ENST00000475243 FN1P02751 2386 aaKnown RBP8.12□□□□□ -1.11
VAPB-204ENST00000475243 H7C423 109 aa8.12□□□□□ -1.11
VAPB-204ENST00000475243 SHISA2Q6UWI4 295 aa8.12□□□□□ -1.11
VAPB-204ENST00000475243 RNF185Q96GF1 192 aa8.12□□□□□ -1.11
VAPB-204ENST00000475243 NAV2Q8IVL1 2488 aa8.12□□□□□ -1.11
VAPB-204ENST00000475243 TRIAP1O43715 76 aa8.12□□□□□ -1.11
VAPB-204ENST00000475243 SYCNQ0VAF6 134 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 SMR3AQ99954 134 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 ZNF702PQ9H963 129 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 IBA57-AS1B1ANH7 110 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 LINC01006Q8NI28 216 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
VAPB-204ENST00000475243 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
VAPB-204ENST00000475243 KIR2DL5BQ8NHK3 375 aa8.1□□□□□ -1.11
VAPB-204ENST00000475243 CCKP06307 115 aa8.1□□□□□ -1.11
VAPB-204ENST00000475243 NANOS2P60321 138 aaKnown RBP8.1□□□□□ -1.11
VAPB-204ENST00000475243 RBX1P62877 108 aa8.1□□□□□ -1.11
VAPB-204ENST00000475243 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
VAPB-204ENST00000475243 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
VAPB-204ENST00000475243 MBD6Q96DN6 1003 aa8.1□□□□□ -1.11
VAPB-204ENST00000475243 TRAV10A0A0B4J240 114 aa8.09□□□□□ -1.11
VAPB-204ENST00000475243 PSMG3-AS1Q96PY0 264 aa8.09□□□□□ -1.11
VAPB-204ENST00000475243 IGLV9-49A0A0B4J1Y8 123 aa8.09□□□□□ -1.11
VAPB-204ENST00000475243 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
VAPB-204ENST00000475243 UBE2D1P51668 147 aa8.09□□□□□ -1.11
VAPB-204ENST00000475243 TLN2Q9Y4G6 2542 aa8.09□□□□□ -1.11
VAPB-204ENST00000475243 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
VAPB-204ENST00000475243 CDSNQ15517 529 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms