RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 COX6B1P14854 86 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 MRPS36P82909 103 aaKnown RBP2.31□□□□□ -2.04
BRCA1-212ENST00000473961 PLGLAQ15195 96 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 SFTA2Q6UW10 78 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 CCL4L1Q8NHW4 92 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 TMEM263Q8WUH6 116 aaKnown RBP2.31□□□□□ -2.04
BRCA1-212ENST00000473961 CNFNQ9BYD5 112 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 DPH3P1Q9H4G8 78 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 LINC00588Q9Y4M8 146 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 SERP1Q9Y6X1 66 aa2.31□□□□□ -2.04
BRCA1-212ENST00000473961 CCL16O15467 120 aa2.3□□□□□ -2.04
BRCA1-212ENST00000473961 NPC2P61916 151 aa2.3□□□□□ -2.04
BRCA1-212ENST00000473961 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
BRCA1-212ENST00000473961 SCGB3A1Q96QR1 104 aa2.3□□□□□ -2.04
BRCA1-212ENST00000473961 UPK3BQ9BT76 320 aa2.3□□□□□ -2.04
BRCA1-212ENST00000473961 PKIGQ9Y2B9 76 aa2.3□□□□□ -2.04
BRCA1-212ENST00000473961 HEATR1Q9H583 2144 aaKnown RBP2.29□□□□□ -2.04
BRCA1-212ENST00000473961 IGKV1D-37A0A075B6S9 117 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 TRBV7-1A0A0A6YYK4 115 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 A0A0J9YX75 114 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 DEFB108AA8MXU0 73 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 LST1O00453 97 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 HRES1P13985 223 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 ZNF22P17026 224 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-212ENST00000473961 CRIP1P50238 77 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 BSPH1Q075Z2 132 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 EXOC3-AS1Q8N2X6 119 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 LINC00311Q8N616 119 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 DAND5Q8N907 189 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 DCANP1Q8TF63 244 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 TOMM6Q96B49 74 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 DSCR8Q96T75 97 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 NDUFA4L2Q9NRX3 87 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 LAMTOR3Q9UHA4 124 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 SPAG17Q6Q759 2223 aa2.29□□□□□ -2.04
BRCA1-212ENST00000473961 TRBV19A0A075B6N1 114 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 TRGV5A0A0B4J1U4 118 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 IGHV3-15A0A0B4J1V0 119 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 TRAV41A0A0B4J266 112 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 FAM236DA0A1B0GTK5 79 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 A0A1B0GU33 70 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 SDHAF1A6NFY7 115 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 C11orf86A6NJI1 115 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 LECT2O14960 151 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 BCE1O60756 84 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 PPP1R17O96001 155 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 IGHV3-30-3P0DP02 117 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 FAM236CP0DP71 79 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 LGALS3P17931 250 aaKnown RBP2.28□□□□□ -2.04
BRCA1-212ENST00000473961 PDE6HQ13956 83 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 VMA21Q3ZAQ7 101 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 RPL39P5Q59GN2 51 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 FAM201AQ5SY85 155 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.28□□□□□ -2.04
BRCA1-212ENST00000473961 FAM216BQ8N7L0 139 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 C10orf105Q8TEF2 133 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 PATE1Q8WXA2 126 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 TMEM141Q96I45 108 aa2.28□□□□□ -2.04
BRCA1-212ENST00000473961 GPR179Q6PRD1 2367 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 KNCNA6PVL3 124 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 H7C2G1 150 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 LEPROTO15243 131 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 MRPL33O75394 65 aaKnown RBP2.27□□□□□ -2.05
BRCA1-212ENST00000473961 LYZL6O75951 148 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 RHOHQ15669 191 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 Q6JHZ5 121 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 MUSTN1Q8IVN3 82 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 C1orf158Q8N1D5 194 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 LINC00304Q8N9R0 145 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 TMEM167AQ8TBQ9 72 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 SMCR5Q8TEV8 140 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 SLC50A1Q9BRV3 221 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 TIMM21Q9BVV7 248 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 SMIM2Q9BVW6 85 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 PROK2Q9HC23 129 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 TET1Q8NFU7 2136 aa2.27□□□□□ -2.05
BRCA1-212ENST00000473961 IQCF6A8MYZ5 107 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 M0R381 172 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 M0R3E3 92 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 SAA1P0DJI8 122 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-212ENST00000473961 SAA2P0DJI9 122 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-212ENST00000473961 ATP5EP56381 51 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-212ENST00000473961 PMAIP1Q13794 54 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 Q8NAQ8 132 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 LY6G5BQ8NDX9 201 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 AMELXQ99217 191 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 CYSTM1Q9H1C7 97 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 C16orf95Q9H693 158 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 USF3Q68DE3 2245 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
BRCA1-212ENST00000473961 UNC13CQ8NB66 2214 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 SPTY2D1-AS1A0A0U1RR47 76 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 H3BRN7 92 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 I3L3M4 83 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 NDUFC1O43677 76 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 BAALC-AS2P0C853 105 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 LINC00313P59037 77 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 WT1-ASQ06250 92 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms