RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 USMG5Q96IX5 58 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 FOXC2Q99958 501 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 WFDC10AQ9H1F0 79 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 MS4A6AQ9H2W1 248 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 DAZ1Q9NQZ3 744 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 PEF1Q9UBV8 284 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 SMPXQ9UHP9 88 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 NAGKQ9UJ70 344 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 ZFP30Q9Y2G7 519 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 UFC1Q9Y3C8 167 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 U3KQK5 164 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 HMCN2Q8NDA2 5059 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV12-2A0A075B6T6 113 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV12-3A0A0B4J271 114 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV21A0A0B4J279 112 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 A0A0G2JLM5 398 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 LOC389332A0A1B0GUA5 103 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 C7orf71A4D174 169 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 LINC01546A6NGU7 62 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 E9PLD3 99 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 LINC01619G3V211 115 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SYS1-DBNDD2H3BUS1 97 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 K7EMT4 169 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 K7EQM0 130 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 M0R381 172 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 LGALS9O00182 355 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 OVOL1O14753 267 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 GNRH2O43555 120 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 HSBP1O75506 76 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SCGB2A1O75556 95 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 NDUFA7O95182 113 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 HBDP02042 147 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 ORM1P02763 201 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 PRM2P04554 102 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 CD7P09564 240 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 OR5AL1P0C617 328 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 FGF6P10767 208 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 HLA-DRB4P13762 266 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 IGLL1P15814 213 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 RAB4AP20338 218 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 NTF3P20783 257 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 DDTP30046 118 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 RNASE4P34096 147 aaKnown RBP0.91□□□□□ -2.26
CCDC39-203ENST00000473854 IFI27P40305 119 aaPredicted RBP0.91□□□□□ -2.26
CCDC39-203ENST00000473854 CSN1S1P47710 185 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 TCTAP57738 103 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 DEFB131AP59861 70 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 RPS20P60866 119 aaKnown RBP0.91□□□□□ -2.26
CCDC39-203ENST00000473854 KRTDAPP60985 99 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 PRR4Q16378 134 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SPINK13Q1W4C9 94 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 COX19Q49B96 90 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SPATA45Q537H7 98 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 PSMG4Q5JS54 123 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SAPCD1Q5SSQ6 148 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM78Q5T7P6 136 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 FOXI2Q6ZQN5 318 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 C2orf91Q6ZV80 131 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 S100A7AQ86SG5 101 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 OR11H1Q8NG94 326 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 OR9G4Q8NGQ1 327 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 OR1N2Q8NGR9 330 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 CHCHD1Q96BP2 118 aaKnown RBP0.91□□□□□ -2.26
CCDC39-203ENST00000473854 UBE2E2Q96LR5 201 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 PRELID3AQ96N28 172 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 ODF3Q96PU9 254 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 PMCHL2Q9BQD1 86 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SPXQ9BT56 116 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 NDFIP1Q9BT67 221 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SNHG12Q9BXW3 62 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SAMD10Q9BYL1 202 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM191AQ9H0A3 160 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 C16orf95Q9H693 158 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 YAE1D1Q9NRH1 226 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 SIGLEC8Q9NYZ4 499 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 TIMM8BQ9Y5J9 83 aaPredicted RBP0.91□□□□□ -2.26
CCDC39-203ENST00000473854 LENEPQ9Y5L5 61 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 HLA-DRB4X5D2U9 266 aa0.91□□□□□ -2.26
CCDC39-203ENST00000473854 LPAP08519 4548 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 IGLV4-69A0A075B6H9 119 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV1OR15-1A0A075B7D0 117 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 IGKV2D-26A0A0A0MRZ7 120 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3-73A0A0B4J1V6 119 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV2A0A0B4J234 112 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 A0A1B0GV90 55 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 A0A1B0GW15 77 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 PLAC8L1A1L4L8 177 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 OR4C46A6NHA9 309 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 FABP5P3A8MUU1 101 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TSTD3H0UI37 97 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 H0Y8G0 127 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 H3BMM0 161 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TCAPO15273 167 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 TCF21O43680 179 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LEPROTL1O95214 131 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 IGLV1-51P01701 117 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 MGPP08493 103 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 LINC00614P0C842 121 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 P0DMU3 169 aa0.9□□□□□ -2.27
CCDC39-203ENST00000473854 FAM231AP0DMU4 169 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms