RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 ASIPP42127 132 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 FXYD6P3P58550 94 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 ALKAL2Q6UX46 152 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 CASC2Q6XLA1 102 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 ZNF720Q7Z2F6 126 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 COMMD6Q7Z4G1 85 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 C5orf38Q86SI9 138 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 Q8N6K4 173 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 TSKUQ8WUA8 353 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 TSLPQ969D9 159 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 SPTSSAQ969W0 71 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 PMCHL2Q9BQD1 86 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 C20orf78Q9BR46 151 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 ATG5Q9H1Y0 275 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 BET1LQ9NYM9 111 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 NRAPQ86VF7 1730 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 ABCC1P33527 1531 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 EHBP1L1Q8N3D4 1523 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 PAPPA2Q9BXP8 1791 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 DIP2AQ14689 1571 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 MAST1Q9Y2H9 1570 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 PLIN4Q96Q06 1357 aa0.57□□□□□ -2.32
GINS1-202ENST00000473460 LAMC1P11047 1609 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 NHSL1Q5SYE7 1610 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 BLMP54132 1417 aaPredicted RBP0.56□□□□□ -2.32
GINS1-202ENST00000473460 PRXQ9BXM0 1461 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 LY75O60449 1722 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 DDX60LQ5H9U9 1706 aaKnown RBP0.56□□□□□ -2.32
GINS1-202ENST00000473460 RICTORQ6R327 1708 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 ASXL1Q8IXJ9 1541 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 SYCP2Q9BX26 1530 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 TRAV2A0A0B4J234 112 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 A0A0J9YY99 117 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 GNGT2O14610 69 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 CYB5AP00167 134 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 IGKCP01834 107 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 GYPAP02724 150 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 PIPP12273 146 aaPredicted RBP0.56□□□□□ -2.32
GINS1-202ENST00000473460 SNCAP37840 140 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 MIR22HGQ0VDD5 57 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 PEA15Q15121 130 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 S100A7L2Q5SY68 101 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 SPANXN1Q5VSR9 72 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 SLC48A1Q6P1K1 146 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 SLC25A26Q70HW3 274 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 FAM213BQ8TBF2 198 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 DYNLRB2Q8TF09 96 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 TMEM141Q96I45 108 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 SMIM7Q9BQ49 75 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 MRPL35Q9NZE8 188 aaKnown RBP0.56□□□□□ -2.32
GINS1-202ENST00000473460 LINC00474Q9P2X8 69 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 UQCR10Q9UDW1 63 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 NDUFA12Q9UI09 145 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 DOCK11Q5JSL3 2073 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 SNRNP200O75643 2136 aaKnown RBP0.56□□□□□ -2.32
GINS1-202ENST00000473460 UBR3Q6ZT12 1888 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 NRXN3Q9Y4C0 1643 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 C3P01024 1663 aa0.56□□□□□ -2.32
GINS1-202ENST00000473460 FMN2Q9NZ56 1722 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 RALGAPBQ86X10 1494 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 FANCD2Q9BXW9 1451 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 UGGT1Q9NYU2 1555 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 TRAV23DV6A0A075B6W5 121 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 TRBV7-1A0A0A6YYK4 115 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 LOC107984156A0A0G2JMH3 177 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 TRBV10-3A0A0K0K1G6 114 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 CXorf51AA0A1B0GTR3 108 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 SYS1-DBNDD2H3BUS1 97 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 H7BZZ5 65 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 PDCD5O14737 125 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 CFDP00746 253 aaPredicted RBP0.55□□□□□ -2.32
GINS1-202ENST00000473460 APOC3P02656 99 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 IGLC2P0DOY2 106 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 IGLC3P0DOY3 106 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 PRB4P10163 310 aaPredicted RBP0.55□□□□□ -2.32
GINS1-202ENST00000473460 POLR2JP52435 117 aaKnown RBP0.55□□□□□ -2.32
GINS1-202ENST00000473460 UBE2D3P61077 147 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 UBE2D2P62837 147 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 RBM3P98179 157 aaKnown RBP0.55□□□□□ -2.32
GINS1-202ENST00000473460 PRB3Q04118 309 aaPredicted RBP0.55□□□□□ -2.32
GINS1-202ENST00000473460 BVES-AS1Q5T3Y7 98 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 LYPD5Q6UWN5 251 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 VMO1Q7Z5L0 202 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 ARL17AQ8IVW1 177 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 PPDPFLQ8WWR9 84 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 S100A16Q96FQ6 103 aaKnown RBP0.55□□□□□ -2.32
GINS1-202ENST00000473460 LINC01600Q96MT4 127 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 S100A13Q99584 98 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 ST20Q9HBF5 79 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 SMCO4Q9NRQ5 59 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 CACFD1Q9UGQ2 172 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 SPCS1Q9Y6A9 102 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 BIVM-ERCC5R4GMW8 1640 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 QSER1Q2KHR3 1735 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 MYO7BQ6PIF6 2116 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 ZGRF1Q86YA3 2104 aa0.55□□□□□ -2.32
GINS1-202ENST00000473460 EDC4Q6P2E9 1401 aaKnown RBP0.55□□□□□ -2.32
GINS1-202ENST00000473460 CD163L1Q9NR16 1453 aa0.54□□□□□ -2.32
GINS1-202ENST00000473460 NEXMIFQ5QGS0 1516 aa0.54□□□□□ -2.32
GINS1-202ENST00000473460 DUOX2Q9NRD8 1548 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 281 ms