RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 C4orf3Q8WVX3 66 aa14.7□□□□□ -0.06
FSCN1-205ENST00000473330 CITED2Q99967 270 aaPredicted RBP14.7□□□□□ -0.06
FSCN1-205ENST00000473330 MXRA5Q9NR99 2828 aa14.7□□□□□ -0.06
FSCN1-205ENST00000473330 GAGE2BQ13066 116 aa14.69□□□□□ -0.06
FSCN1-205ENST00000473330 GAGE2EQ4V326 116 aa14.69□□□□□ -0.06
FSCN1-205ENST00000473330 GAGE2DQ9UEU5 116 aa14.69□□□□□ -0.06
FSCN1-205ENST00000473330 IGLV5-39A0A0G2JS06 123 aa14.69□□□□□ -0.06
FSCN1-205ENST00000473330 LINC00242Q5T6M2 205 aa14.69□□□□□ -0.06
FSCN1-205ENST00000473330 ANKRD17O75179 2603 aaKnown RBP14.68□□□□□ -0.06
FSCN1-205ENST00000473330 KHDC1LQ5JSQ8 128 aa14.68□□□□□ -0.06
FSCN1-205ENST00000473330 XCL2Q9UBD3 114 aa14.68□□□□□ -0.06
FSCN1-205ENST00000473330 NHLRC4P0CG21 123 aaPredicted RBP14.68□□□□□ -0.06
FSCN1-205ENST00000473330 LINC00694P0DN24 101 aa14.68□□□□□ -0.06
FSCN1-205ENST00000473330 LINC00308Q8TCZ7 52 aa14.68□□□□□ -0.06
FSCN1-205ENST00000473330 Q9H8V8 135 aa14.68□□□□□ -0.06
FSCN1-205ENST00000473330 HERVK_113P63121 156 aa14.67□□□□□ -0.06
FSCN1-205ENST00000473330 CIRBPQ14011 172 aaKnown RBP14.67□□□□□ -0.06
FSCN1-205ENST00000473330 NDUFA7O95182 113 aa14.66□□□□□ -0.06
FSCN1-205ENST00000473330 C15orf53Q8NAA6 179 aa14.66□□□□□ -0.06
FSCN1-205ENST00000473330 ZNF625Q96I27 306 aaPredicted RBP14.66□□□□□ -0.06
FSCN1-205ENST00000473330 C1orf158Q8N1D5 194 aa14.65□□□□□ -0.06
FSCN1-205ENST00000473330 CR1P17927 2039 aa14.65□□□□□ -0.06
FSCN1-205ENST00000473330 FAM19A3Q7Z5A8 133 aa14.65□□□□□ -0.06
FSCN1-205ENST00000473330 IL17DQ8TAD2 202 aa14.65□□□□□ -0.06
FSCN1-205ENST00000473330 FBN2P35556 2912 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 A0A0U1RRA0 63 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 ODF3L2Q3SX64 289 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 DEFB121Q5J5C9 76 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 POLQO75417 2590 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 TRGV1A0A0A0MS02 117 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 SMIM1B2RUZ4 78 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 NDUFV3P56181 108 aaKnown RBP14.64□□□□□ -0.07
FSCN1-205ENST00000473330 Q6Q795 121 aa14.64□□□□□ -0.07
FSCN1-205ENST00000473330 NTM-AS1Q6ZSK4 140 aa14.63□□□□□ -0.07
FSCN1-205ENST00000473330 SOSTDC1Q6X4U4 206 aa14.62□□□□□ -0.07
FSCN1-205ENST00000473330 IGSF10Q6WRI0 2623 aa14.62□□□□□ -0.07
FSCN1-205ENST00000473330 CSDC2Q9Y534 153 aaKnown RBP14.61□□□□□ -0.07
FSCN1-205ENST00000473330 TRAV13-1A0A0B4J241 112 aa14.61□□□□□ -0.07
FSCN1-205ENST00000473330 STHQ8IWL8 128 aa14.6□□□□□ -0.07
FSCN1-205ENST00000473330 K7EQD1 137 aa14.6□□□□□ -0.07
FSCN1-205ENST00000473330 RPL36AP83881 106 aaKnown RBP14.6□□□□□ -0.07
FSCN1-205ENST00000473330 RPL36ALQ969Q0 106 aaKnown RBP14.6□□□□□ -0.07
FSCN1-205ENST00000473330 TTC32Q5I0X7 151 aa14.59□□□□□ -0.07
FSCN1-205ENST00000473330 FAM240AA0A1B0GVK7 77 aa14.58□□□□□ -0.07
FSCN1-205ENST00000473330 GAGE5Q13069 117 aa14.58□□□□□ -0.07
FSCN1-205ENST00000473330 GAGE6Q13070 117 aa14.58□□□□□ -0.07
FSCN1-205ENST00000473330 Q6ZTI0 123 aa14.58□□□□□ -0.07
FSCN1-205ENST00000473330 TRBV10-1A0A0K0K1A3 114 aa14.58□□□□□ -0.08
FSCN1-205ENST00000473330 F5H768 121 aa14.58□□□□□ -0.08
FSCN1-205ENST00000473330 COX7A2LO14548 114 aa14.58□□□□□ -0.08
FSCN1-205ENST00000473330 SHISA2Q6UWI4 295 aa14.58□□□□□ -0.08
FSCN1-205ENST00000473330 CDC42SE2Q9NRR3 84 aa14.58□□□□□ -0.08
FSCN1-205ENST00000473330 DAZ2Q13117 558 aaKnown RBP14.57□□□□□ -0.08
FSCN1-205ENST00000473330 DAZ4Q86SG3 579 aaKnown RBP14.57□□□□□ -0.08
FSCN1-205ENST00000473330 PRIMA1Q86XR5 153 aa14.57□□□□□ -0.08
FSCN1-205ENST00000473330 DAZ3Q9NR90 486 aaKnown RBP14.57□□□□□ -0.08
FSCN1-205ENST00000473330 MRPL23Q16540 153 aaKnown RBP14.57□□□□□ -0.08
FSCN1-205ENST00000473330 PIEZO1Q92508 2521 aa14.57□□□□□ -0.08
FSCN1-205ENST00000473330 KRTAP10-9P60411 292 aa14.56□□□□□ -0.08
FSCN1-205ENST00000473330 MEIG1Q5JSS6 88 aa14.56□□□□□ -0.08
FSCN1-205ENST00000473330 MYO18BQ8IUG5 2567 aa14.56□□□□□ -0.08
FSCN1-205ENST00000473330 GAGE12JA6NER3 117 aa14.56□□□□□ -0.08
FSCN1-205ENST00000473330 GAGE4Q13068 117 aa14.56□□□□□ -0.08
FSCN1-205ENST00000473330 COPS9Q8WXC6 57 aa14.55□□□□□ -0.08
FSCN1-205ENST00000473330 AKAP9Q99996 3911 aa14.55□□□□□ -0.08
FSCN1-205ENST00000473330 TRAV25A0A0B4J276 109 aa14.54□□□□□ -0.08
FSCN1-205ENST00000473330 Q96MF0 132 aa14.54□□□□□ -0.08
FSCN1-205ENST00000473330 MYO9AB2RTY4 2548 aa14.53□□□□□ -0.08
FSCN1-205ENST00000473330 TEX15Q9BXT5 2789 aa14.53□□□□□ -0.08
FSCN1-205ENST00000473330 ACACBO00763 2458 aa14.53□□□□□ -0.08
FSCN1-205ENST00000473330 B5MCH6 92 aa14.53□□□□□ -0.08
FSCN1-205ENST00000473330 HERV-K104P63124 156 aa14.51□□□□□ -0.09
FSCN1-205ENST00000473330 CCDC179H3BU77 68 aa14.51□□□□□ -0.09
FSCN1-205ENST00000473330 C11orf44Q8N8P7 122 aa14.51□□□□□ -0.09
FSCN1-205ENST00000473330 NOP10Q9NPE3 64 aaKnown RBP14.51□□□□□ -0.09
FSCN1-205ENST00000473330 SS18L2Q9UHA2 77 aa14.51□□□□□ -0.09
FSCN1-205ENST00000473330 A0A1W2PRX2 142 aa14.5□□□□□ -0.09
FSCN1-205ENST00000473330 GAGE7O76087 117 aa14.49□□□□□ -0.09
FSCN1-205ENST00000473330 GAGE12FP0CL80 117 aa14.49□□□□□ -0.09
FSCN1-205ENST00000473330 GAGE12GP0CL81 117 aa14.49□□□□□ -0.09
FSCN1-205ENST00000473330 GAGE12IP0CL82 117 aa14.49□□□□□ -0.09
FSCN1-205ENST00000473330 DEFB113Q30KQ7 82 aa14.49□□□□□ -0.09
FSCN1-205ENST00000473330 CENPEQ02224 2701 aa14.49□□□□□ -0.09
FSCN1-205ENST00000473330 FAM208BQ5VWN6 2430 aa14.48□□□□□ -0.09
FSCN1-205ENST00000473330 CHD6Q8TD26 2715 aa14.48□□□□□ -0.09
FSCN1-205ENST00000473330 PRB1P04280 392 aa14.48□□□□□ -0.09
FSCN1-205ENST00000473330 TMEM243Q9BU79 118 aa14.48□□□□□ -0.09
FSCN1-205ENST00000473330 UBE2L6O14933 153 aa14.47□□□□□ -0.09
FSCN1-205ENST00000473330 TRACP01848 142 aa14.47□□□□□ -0.09
FSCN1-205ENST00000473330 FAM218AQ96MZ4 157 aa14.47□□□□□ -0.09
FSCN1-205ENST00000473330 PPDPFQ9H3Y8 114 aa14.47□□□□□ -0.09
FSCN1-205ENST00000473330 GIG44P09565 113 aaPredicted RBP14.47□□□□□ -0.09
FSCN1-205ENST00000473330 CACNA1AO00555 2505 aa14.46□□□□□ -0.09
FSCN1-205ENST00000473330 PTPN13Q12923 2485 aa14.46□□□□□ -0.09
FSCN1-205ENST00000473330 LOC100131303A0A0U1RQF7 123 aa14.46□□□□□ -0.09
FSCN1-205ENST00000473330 CCL24O00175 119 aa14.46□□□□□ -0.09
FSCN1-205ENST00000473330 TRBV7-7A0A0K0K1E9 115 aa14.46□□□□□ -0.1
FSCN1-205ENST00000473330 PLAC8L1A1L4L8 177 aa14.46□□□□□ -0.1
FSCN1-205ENST00000473330 WNK1Q9H4A3 2382 aa14.45□□□□□ -0.1
FSCN1-205ENST00000473330 C22orf24Q9Y442 160 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms