RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 LINC01587Q99440 93 aa15.27■□□□□ 0.03
COL18A1-207ENST00000473212 CITED1Q99966 193 aa15.27■□□□□ 0.03
COL18A1-207ENST00000473212 BBC3Q96PG8 261 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-207ENST00000473212 UBR5O95071 2799 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-207ENST00000473212 J3QLI3 93 aa15.26■□□□□ 0.03
COL18A1-207ENST00000473212 C11orf44Q8N8P7 122 aa15.26■□□□□ 0.03
COL18A1-207ENST00000473212 MAP6D1Q9H9H5 199 aa15.26■□□□□ 0.03
COL18A1-207ENST00000473212 CDKN2A-AS1Q9UH64 79 aa15.26■□□□□ 0.03
COL18A1-207ENST00000473212 ITPR3Q14573 2671 aa15.26■□□□□ 0.03
COL18A1-207ENST00000473212 CLEC2BQ92478 149 aa15.25■□□□□ 0.03
COL18A1-207ENST00000473212 C2orf82Q6UX34 121 aa15.25■□□□□ 0.03
COL18A1-207ENST00000473212 C11orf72Q8NBR9 251 aa15.25■□□□□ 0.03
COL18A1-207ENST00000473212 H7C423 109 aa15.24■□□□□ 0.03
COL18A1-207ENST00000473212 RPL13AP40429 203 aaKnown RBP15.24■□□□□ 0.03
COL18A1-207ENST00000473212 LINC01600Q96MT4 127 aa15.24■□□□□ 0.03
COL18A1-207ENST00000473212 ANAPC13Q9BS18 74 aa15.24■□□□□ 0.03
COL18A1-207ENST00000473212 SETXQ7Z333 2677 aaKnown RBP15.24■□□□□ 0.03
COL18A1-207ENST00000473212 CRLF1O75462 422 aa15.24■□□□□ 0.03
COL18A1-207ENST00000473212 IGHV3-53P01767 116 aa15.24■□□□□ 0.03
COL18A1-207ENST00000473212 PIK3CD-AS1Q5SR53 167 aa15.24■□□□□ 0.03
COL18A1-207ENST00000473212 UBE2WQ96B02 151 aa15.24■□□□□ 0.03
COL18A1-207ENST00000473212 COX6CP09669 75 aa15.23■□□□□ 0.03
COL18A1-207ENST00000473212 IGHV3OR16-12A0A075B7B8 117 aa15.23■□□□□ 0.03
COL18A1-207ENST00000473212 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-207ENST00000473212 XCL2Q9UBD3 114 aa15.23■□□□□ 0.03
COL18A1-207ENST00000473212 TRAV8-4A0A0B4J246 113 aa15.22■□□□□ 0.03
COL18A1-207ENST00000473212 TRAV4A0A0B4J268 109 aa15.22■□□□□ 0.03
COL18A1-207ENST00000473212 SNCGO76070 127 aa15.22■□□□□ 0.03
COL18A1-207ENST00000473212 YAE1D1Q9NRH1 226 aa15.22■□□□□ 0.03
COL18A1-207ENST00000473212 TMEM101Q96IK0 257 aa15.22■□□□□ 0.03
COL18A1-207ENST00000473212 DNAJC30Q96LL9 226 aa15.21■□□□□ 0.03
COL18A1-207ENST00000473212 COX6A2Q02221 97 aa15.2■□□□□ 0.02
COL18A1-207ENST00000473212 DGAT2L7PQ6IED9 249 aa15.2■□□□□ 0.02
COL18A1-207ENST00000473212 DYNLRB2Q8TF09 96 aa15.2■□□□□ 0.02
COL18A1-207ENST00000473212 TIMM17BO60830 172 aa15.19■□□□□ 0.02
COL18A1-207ENST00000473212 GAGE2BQ13066 116 aa15.19■□□□□ 0.02
COL18A1-207ENST00000473212 GAGE2EQ4V326 116 aa15.19■□□□□ 0.02
COL18A1-207ENST00000473212 GAGE2DQ9UEU5 116 aa15.19■□□□□ 0.02
COL18A1-207ENST00000473212 FLNAP21333 2647 aaKnown RBP15.19■□□□□ 0.02
COL18A1-207ENST00000473212 BEAN1Q3B7T3 259 aa15.19■□□□□ 0.02
COL18A1-207ENST00000473212 ACANP16112 2415 aa15.19■□□□□ 0.02
COL18A1-207ENST00000473212 NDUFA1O15239 70 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 RS1O15537 224 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 NDUFA7O95182 113 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 TIRAPP58753 221 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 DEFB114Q30KQ6 69 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 PEMTQ9UBM1 199 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 A0A1W2PRX2 142 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 LST1O00453 97 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 INSP01308 110 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 IFITM1P13164 125 aa15.18■□□□□ 0.02
COL18A1-207ENST00000473212 IGLV5-45A0A087WSX0 123 aa15.17■□□□□ 0.02
COL18A1-207ENST00000473212 ZNF625Q96I27 306 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-207ENST00000473212 MTORP42345 2549 aa15.17■□□□□ 0.02
COL18A1-207ENST00000473212 A0A0U1RRA0 63 aa15.17■□□□□ 0.02
COL18A1-207ENST00000473212 H3BT86 120 aa15.17■□□□□ 0.02
COL18A1-207ENST00000473212 ODF3L2Q3SX64 289 aa15.16■□□□□ 0.02
COL18A1-207ENST00000473212 Q9H8V8 135 aa15.16■□□□□ 0.02
COL18A1-207ENST00000473212 C15orf53Q8NAA6 179 aa15.15■□□□□ 0.02
COL18A1-207ENST00000473212 Q96MF0 132 aa15.15■□□□□ 0.02
COL18A1-207ENST00000473212 CITED2Q99967 270 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-207ENST00000473212 NHLRC4P0CG21 123 aaPredicted RBP15.15■□□□□ 0.02
COL18A1-207ENST00000473212 LINC00694P0DN24 101 aa15.15■□□□□ 0.02
COL18A1-207ENST00000473212 C4orf3Q8WVX3 66 aa15.15■□□□□ 0.02
COL18A1-207ENST00000473212 CIRBPQ14011 172 aaKnown RBP15.14■□□□□ 0.01
COL18A1-207ENST00000473212 LINC00242Q5T6M2 205 aa15.14■□□□□ 0.01
COL18A1-207ENST00000473212 Q8N2B8 174 aa15.13■□□□□ 0.01
COL18A1-207ENST00000473212 LINC00308Q8TCZ7 52 aa15.13■□□□□ 0.01
COL18A1-207ENST00000473212 NDUFV3P56181 108 aaKnown RBP15.12■□□□□ 0.01
COL18A1-207ENST00000473212 IGLV5-39A0A0G2JS06 123 aa15.12■□□□□ 0.01
COL18A1-207ENST00000473212 HERVK_113P63121 156 aa15.12■□□□□ 0.01
COL18A1-207ENST00000473212 C1orf158Q8N1D5 194 aa15.12■□□□□ 0.01
COL18A1-207ENST00000473212 TRGV1A0A0A0MS02 117 aa15.11■□□□□ 0.01
COL18A1-207ENST00000473212 TRAV13-1A0A0B4J241 112 aa15.1■□□□□ 0.01
COL18A1-207ENST00000473212 TTC32Q5I0X7 151 aa15.1■□□□□ 0.01
COL18A1-207ENST00000473212 ZNF843Q8N446 348 aa15.1■□□□□ 0.01
COL18A1-207ENST00000473212 Q6ZTI0 123 aa15.09■□□□□ 0.01
COL18A1-207ENST00000473212 SMIM1B2RUZ4 78 aa15.09■□□□□ 0.01
COL18A1-207ENST00000473212 DEFB113Q30KQ7 82 aa15.09■□□□□ 0.01
COL18A1-207ENST00000473212 SOSTDC1Q6X4U4 206 aa15.08■□□□□ 0.01
COL18A1-207ENST00000473212 GAGE5Q13069 117 aa15.08■□□□□ 0
COL18A1-207ENST00000473212 GAGE6Q13070 117 aa15.08■□□□□ 0
COL18A1-207ENST00000473212 Q6Q795 121 aa15.07■□□□□ 0
COL18A1-207ENST00000473212 NTM-AS1Q6ZSK4 140 aa15.07■□□□□ 0
COL18A1-207ENST00000473212 KRTAP1-3Q8IUG1 177 aa15.07■□□□□ 0
COL18A1-207ENST00000473212 WFDC10AQ9H1F0 79 aa15.07■□□□□ 0
COL18A1-207ENST00000473212 STHQ8IWL8 128 aa15.06■□□□□ 0
COL18A1-207ENST00000473212 DEFB121Q5J5C9 76 aa15.06■□□□□ 0
COL18A1-207ENST00000473212 B5MCH6 92 aa15.05■□□□□ 0
COL18A1-207ENST00000473212 RPL36AP83881 106 aaKnown RBP15.05■□□□□ 0
COL18A1-207ENST00000473212 MEIG1Q5JSS6 88 aa15.05■□□□□ 0
COL18A1-207ENST00000473212 PRIMA1Q86XR5 153 aa15.05■□□□□ 0
COL18A1-207ENST00000473212 RPL36ALQ969Q0 106 aaKnown RBP15.05■□□□□ 0
COL18A1-207ENST00000473212 FN1P02751 2386 aaKnown RBP15.05■□□□□ -0
COL18A1-207ENST00000473212 SS18L2Q9UHA2 77 aa15.05■□□□□ -0
COL18A1-207ENST00000473212 K7EQD1 137 aa15.04■□□□□ -0
COL18A1-207ENST00000473212 PLA2G2AP14555 144 aa15.04■□□□□ -0
COL18A1-207ENST00000473212 IL17DQ8TAD2 202 aa15.04■□□□□ -0
COL18A1-207ENST00000473212 GAGE12JA6NER3 117 aa15.03■□□□□ -0
COL18A1-207ENST00000473212 COX7A2LO14548 114 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms