RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 STAB2Q8WWQ8 2551 aa6.73□□□□□ -1.33
CCM2-204ENST00000470837 TRAV12-1A0A0B4J245 112 aa6.72□□□□□ -1.33
CCM2-204ENST00000470837 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
CCM2-204ENST00000470837 ANGP03950 147 aaKnown RBP6.72□□□□□ -1.33
CCM2-204ENST00000470837 RBX1P62877 108 aa6.72□□□□□ -1.33
CCM2-204ENST00000470837 Q6ZUT4 128 aa6.72□□□□□ -1.33
CCM2-204ENST00000470837 SPATA12Q7Z6I5 190 aa6.72□□□□□ -1.33
CCM2-204ENST00000470837 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
CCM2-204ENST00000470837 MRPS16Q9Y3D3 137 aaKnown RBP6.72□□□□□ -1.33
CCM2-204ENST00000470837 CHTOPQ9Y3Y2 248 aaKnown RBP6.72□□□□□ -1.33
CCM2-204ENST00000470837 PRSS29PA6NIE9 313 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 CRPP02741 224 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 PLNP26678 52 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 SEC11AP67812 179 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 JOSD1Q15040 202 aaPredicted RBP6.71□□□□□ -1.34
CCM2-204ENST00000470837 MPV17L2Q567V2 206 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 LGALS9CQ6DKI2 356 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 Q8N976 141 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 OPRPNQ99935 248 aaPredicted RBP6.71□□□□□ -1.34
CCM2-204ENST00000470837 CDC42SE2Q9NRR3 84 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 APLNQ9ULZ1 77 aa6.71□□□□□ -1.34
CCM2-204ENST00000470837 TRAV9-2A0A087WT02 112 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 TRAV13-1A0A0B4J241 112 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 IGKV3OR2-268A0A0C4DH90 116 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 F8VRH5 84 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 SIVA1O15304 175 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 DPM2O94777 84 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 IGHV3-30-3P0DP02 117 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 S100A12P80511 92 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
CCM2-204ENST00000470837 LINC01545Q5VT33 79 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 GEMIN7Q9H840 131 aaKnown RBP6.7□□□□□ -1.34
CCM2-204ENST00000470837 LINC00588Q9Y4M8 146 aa6.7□□□□□ -1.34
CCM2-204ENST00000470837 IGLV4-60A0A075B6I1 120 aa6.69□□□□□ -1.34
CCM2-204ENST00000470837 IGKCP01834 107 aa6.69□□□□□ -1.34
CCM2-204ENST00000470837 SMIM6P0DI80 62 aa6.69□□□□□ -1.34
CCM2-204ENST00000470837 ODF1Q14990 250 aa6.69□□□□□ -1.34
CCM2-204ENST00000470837 SS18Q15532 418 aa6.69□□□□□ -1.34
CCM2-204ENST00000470837 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
CCM2-204ENST00000470837 AMELXQ99217 191 aa6.69□□□□□ -1.34
CCM2-204ENST00000470837 HUWE1Q7Z6Z7 4374 aaKnown RBP6.69□□□□□ -1.34
CCM2-204ENST00000470837 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 C3orf84H3BNL1 204 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 CCL25O15444 150 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 LINC01556Q5JQF7 62 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 LINC00269Q8N2A0 174 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 C10orf126Q8N4M7 172 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 PMCHL2Q9BQD1 86 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 UPK3BQ9BT76 320 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 MRPL35Q9NZE8 188 aaKnown RBP6.68□□□□□ -1.34
CCM2-204ENST00000470837 KLK12Q9UKR0 248 aa6.68□□□□□ -1.34
CCM2-204ENST00000470837 DNAH9Q9NYC9 4486 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 K7EP13 123 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 DNAH10OSP0CZ25 163 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 HERVK_113P61574 105 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 HERVK_113P63121 156 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 REG3AQ06141 175 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 PYY3Q5JQD4 70 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 TMEM170BQ5T4T1 132 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 CLPSL2Q6UWE3 100 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 CHAC1Q9BUX1 264 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 Q9H8V8 135 aa6.67□□□□□ -1.34
CCM2-204ENST00000470837 A0A0J9YXV3 536 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 TINCRA0A1B0GVN0 87 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 H3BRM9 83 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 UBE2D1P51668 147 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
CCM2-204ENST00000470837 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 LINC00469Q8N7U9 141 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 VAMP8Q9BV40 100 aa6.66□□□□□ -1.34
CCM2-204ENST00000470837 TRAV8-4A0A0B4J246 113 aa6.65□□□□□ -1.34
CCM2-204ENST00000470837 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
CCM2-204ENST00000470837 IGLC3P0DOY3 106 aa6.65□□□□□ -1.34
CCM2-204ENST00000470837 RMI2Q96E14 147 aa6.65□□□□□ -1.34
CCM2-204ENST00000470837 TRAV8-3A0A0A6YYJ7 113 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 XCL1P47992 114 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 MIAQ16674 131 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 TTC32Q5I0X7 151 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 NFE4Q86UQ8 179 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 Q8N3U1 123 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 FAM104AQ969W3 186 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 C12orf57Q99622 126 aa6.64□□□□□ -1.35
CCM2-204ENST00000470837 IGLV4-69A0A075B6H9 119 aa6.63□□□□□ -1.35
CCM2-204ENST00000470837 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
CCM2-204ENST00000470837 PRKDCP78527 4128 aaKnown RBP6.63□□□□□ -1.35
CCM2-204ENST00000470837 CASC10Q5T4H9 136 aa6.63□□□□□ -1.35
CCM2-204ENST00000470837 LINC00242Q5T6M2 205 aa6.63□□□□□ -1.35
CCM2-204ENST00000470837 C1orf43Q9BWL3 253 aa6.63□□□□□ -1.35
CCM2-204ENST00000470837 PRR34Q9NV39 138 aa6.63□□□□□ -1.35
CCM2-204ENST00000470837 IGLV10-54A0A075B6I4 117 aa6.62□□□□□ -1.35
CCM2-204ENST00000470837 MALP21145 153 aa6.62□□□□□ -1.35
CCM2-204ENST00000470837 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
CCM2-204ENST00000470837 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
CCM2-204ENST00000470837 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms