RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 LINC00518Q8N0U6 118 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 Q8N976 141 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 CHCHD5Q9BSY4 110 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 VCX2Q9H322 139 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 KLK5Q9Y337 293 aaPredicted RBP8.75□□□□□ -1.01
TRAF4-208ENST00000469529 DYNC2H1Q8NCM8 4307 aaKnown RBP8.74□□□□□ -1.01
TRAF4-208ENST00000469529 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
TRAF4-208ENST00000469529 IGLL5B9A064 214 aa8.74□□□□□ -1.01
TRAF4-208ENST00000469529 PYY3Q5JQD4 70 aa8.74□□□□□ -1.01
TRAF4-208ENST00000469529 DGAT2L7PQ6IED9 249 aa8.74□□□□□ -1.01
TRAF4-208ENST00000469529 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
TRAF4-208ENST00000469529 TMEM101Q96IK0 257 aa8.74□□□□□ -1.01
TRAF4-208ENST00000469529 C20orf202A1L168 122 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 CCL25O15444 150 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 SMIM6P0DI80 62 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 ODF1Q14990 250 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 AMMECR1LQ6DCA0 310 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 ZFAND6Q6FIF0 208 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 ZNF664Q8N3J9 261 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 OR5A1Q8NGJ0 315 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 UPK3BQ9BT76 320 aa8.73□□□□□ -1.01
TRAF4-208ENST00000469529 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
TRAF4-208ENST00000469529 CCL18P55774 89 aa8.72□□□□□ -1.01
TRAF4-208ENST00000469529 RBX1P62877 108 aa8.72□□□□□ -1.01
TRAF4-208ENST00000469529 GAGE6Q13070 117 aa8.72□□□□□ -1.01
TRAF4-208ENST00000469529 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
TRAF4-208ENST00000469529 F8VRH5 84 aa8.71□□□□□ -1.02
TRAF4-208ENST00000469529 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
TRAF4-208ENST00000469529 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
TRAF4-208ENST00000469529 OPRPNQ99935 248 aaPredicted RBP8.71□□□□□ -1.02
TRAF4-208ENST00000469529 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
TRAF4-208ENST00000469529 K7EP13 123 aa8.7□□□□□ -1.02
TRAF4-208ENST00000469529 NFE4Q86UQ8 179 aa8.7□□□□□ -1.02
TRAF4-208ENST00000469529 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
TRAF4-208ENST00000469529 LINC00588Q9Y4M8 146 aa8.7□□□□□ -1.02
TRAF4-208ENST00000469529 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 DNAH10OSP0CZ25 163 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 PLNP26678 52 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 SEC11AP67812 179 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 MPV17L2Q567V2 206 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 Q6ZUT4 128 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 C2orf88Q9BSF0 95 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
TRAF4-208ENST00000469529 DNAH7Q8WXX0 4024 aa8.69□□□□□ -1.02
TRAF4-208ENST00000469529 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
TRAF4-208ENST00000469529 DPM2O94777 84 aa8.68□□□□□ -1.02
TRAF4-208ENST00000469529 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
TRAF4-208ENST00000469529 UBE2D1P51668 147 aa8.68□□□□□ -1.02
TRAF4-208ENST00000469529 IGLV4-69A0A075B6H9 119 aa8.67□□□□□ -1.02
TRAF4-208ENST00000469529 IGKCP01834 107 aa8.67□□□□□ -1.02
TRAF4-208ENST00000469529 C12orf57Q99622 126 aa8.67□□□□□ -1.02
TRAF4-208ENST00000469529 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
TRAF4-208ENST00000469529 ZC2HC1BQ5TFG8 222 aa8.66□□□□□ -1.02
TRAF4-208ENST00000469529 WFDC10BQ8IUB3 73 aa8.66□□□□□ -1.02
TRAF4-208ENST00000469529 TRAV9-2A0A087WT02 112 aa8.65□□□□□ -1.02
TRAF4-208ENST00000469529 LCE6AA0A183 80 aa8.65□□□□□ -1.02
TRAF4-208ENST00000469529 H0Y8G0 127 aa8.65□□□□□ -1.02
TRAF4-208ENST00000469529 SIVA1O15304 175 aa8.65□□□□□ -1.02
TRAF4-208ENST00000469529 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
TRAF4-208ENST00000469529 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 A0A0J9YXV3 536 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 HERVK_113P63121 156 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 Q9H8V8 135 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
TRAF4-208ENST00000469529 RYR3Q15413 4870 aa8.63□□□□□ -1.03
TRAF4-208ENST00000469529 ANGP03950 147 aaKnown RBP8.63□□□□□ -1.03
TRAF4-208ENST00000469529 REG3AQ06141 175 aa8.63□□□□□ -1.03
TRAF4-208ENST00000469529 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
TRAF4-208ENST00000469529 SS18Q15532 418 aa8.62□□□□□ -1.03
TRAF4-208ENST00000469529 MIAQ16674 131 aa8.62□□□□□ -1.03
TRAF4-208ENST00000469529 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
TRAF4-208ENST00000469529 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
TRAF4-208ENST00000469529 LINC01561Q8N1V8 128 aa8.62□□□□□ -1.03
TRAF4-208ENST00000469529 C10orf126Q8N4M7 172 aa8.62□□□□□ -1.03
TRAF4-208ENST00000469529 PLECQ15149 4684 aaKnown RBP8.62□□□□□ -1.03
TRAF4-208ENST00000469529 TRAV13-1A0A0B4J241 112 aa8.61□□□□□ -1.03
TRAF4-208ENST00000469529 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
TRAF4-208ENST00000469529 IBA57-AS1B1ANH7 110 aa8.61□□□□□ -1.03
TRAF4-208ENST00000469529 Q8N3U1 123 aa8.61□□□□□ -1.03
TRAF4-208ENST00000469529 CHAC1Q9BUX1 264 aa8.61□□□□□ -1.03
TRAF4-208ENST00000469529 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
TRAF4-208ENST00000469529 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
TRAF4-208ENST00000469529 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
TRAF4-208ENST00000469529 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
TRAF4-208ENST00000469529 ZNF22P17026 224 aaPredicted RBP8.6□□□□□ -1.03
TRAF4-208ENST00000469529 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
TRAF4-208ENST00000469529 CD164L2Q6UWJ8 174 aa8.6□□□□□ -1.03
TRAF4-208ENST00000469529 VAMP8Q9BV40 100 aa8.6□□□□□ -1.03
TRAF4-208ENST00000469529 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
TRAF4-208ENST00000469529 H3BRM9 83 aa8.59□□□□□ -1.03
TRAF4-208ENST00000469529 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
TRAF4-208ENST00000469529 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
TRAF4-208ENST00000469529 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
TRAF4-208ENST00000469529 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms