RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TRBV6-5A0A0K0K1A5 114 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 TMEM262E9PQX1 116 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 HSBP1O75506 76 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 SERF1AO75920 110 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 FABP4P15090 132 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 POLR2KP53803 58 aaKnown RBP2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 LINC01547P58512 204 aaPredicted RBP2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 UBE2D3P61077 147 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 UBE2D2P62837 147 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 Q0VG73 95 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 COTL1Q14019 142 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 LAGE3Q14657 143 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 MRPL23Q16540 153 aaKnown RBP2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 FAM19A2Q8N3H0 131 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 KIR2DL4Q99706 377 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 TMEM70Q9BUB7 260 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 SMIM2Q9BVW6 85 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 EDA2RQ9HAV5 297 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 LAMTOR2Q9Y2Q5 125 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
TMEM39A-204ENST00000468545 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 IGKV2-29A2NJV5 120 aaPredicted RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 SMIM1B2RUZ4 78 aa2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 UBE2L6O14933 153 aa2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 S100A2P29034 98 aa2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 CEMP1Q6PRD7 247 aaPredicted RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 DAZ4Q86SG3 579 aaKnown RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 CHCHD5Q9BSY4 110 aa2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 NXT2Q9NPJ8 142 aaKnown RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 DAZ3Q9NR90 486 aaKnown RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 KLK5Q9Y337 293 aaPredicted RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 PRKDCP78527 4128 aaKnown RBP2.81□□□□□ -1.96
TMEM39A-204ENST00000468545 DYNC2H1Q8NCM8 4307 aaKnown RBP2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 TRBV25-1A0A075B6N4 114 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 IGHV1-24A0A0C4DH33 117 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 TRBV27A0A0K0K1C4 114 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 H0Y8G0 127 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 RPL39P62891 51 aaKnown RBP2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 ESRGQ1W209 222 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 ORMDL2Q53FV1 153 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 AMMECR1LQ6DCA0 310 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 LYPD5Q6UWN5 251 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 NTM-AS1Q6ZSK4 140 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 UBE2DNLQ8IWF7 75 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 CHCHD1Q96BP2 118 aaKnown RBP2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 TMEM243Q9BU79 118 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 CHCHD7Q9BUK0 85 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 GTSF1LQ9H1H1 148 aa2.8□□□□□ -1.96
TMEM39A-204ENST00000468545 TRBV6-8A0A0A6YYG3 113 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 TRAV8-6A0A0B4J262 113 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 IGKV3OR2-268A0A0C4DH90 116 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 NUPR2A6NF83 97 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 C5orf52A6NGY3 159 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 H3BNG1 76 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 LEPROTL1O95214 131 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 IGHV3-30P01768 117 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 IGHV3-33P01772 117 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 HBDP02042 147 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 IGHV3-30-5P0DP03 117 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 RPL32P62910 135 aaKnown RBP2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 TMEM97Q5BJF2 176 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 RNASE13Q5GAN3 156 aaKnown RBP2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 ZC2HC1BQ5TFG8 222 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 C2orf66Q6UXQ4 117 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 LINC00173Q6ZV60 143 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 SH2D6Q7Z4S9 175 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 HIST3H2BBQ8N257 126 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 C15orf53Q8NAA6 179 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 MUC7Q8TAX7 377 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 TMEM101Q96IK0 257 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 OPRPNQ99935 248 aaPredicted RBP2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 APLNQ9ULZ1 77 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 CYSLTR1Q9Y271 337 aa2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 PLECQ15149 4684 aaKnown RBP2.79□□□□□ -1.96
TMEM39A-204ENST00000468545 TENM3Q9P273 2699 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 A0A087WX48 190 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 LINC01546A6NGU7 62 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 LINC00694P0DN24 101 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 FGF6P10767 208 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 ESDP10768 282 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 G0S2P27469 103 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 AKR1D1P51857 326 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 CCL18P55774 89 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 KRTDAPP60985 99 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 COA6Q5JTJ3 125 aaKnown RBP2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 LELP1Q5T871 98 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 Q6ZN92 141 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 Q8N976 141 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 C20orf203Q8NBC4 194 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 OR10D4PQ8NGN7 298 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 TOMM6Q96B49 74 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 HSPB8Q9UJY1 196 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
TMEM39A-204ENST00000468545 MEGF8Q7Z7M0 2845 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 IGLV4-60A0A075B6I1 120 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms