RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
VPS26A-204ENST00000467852 SSTP61278 116 aa6.44□□□□□ -1.38
VPS26A-204ENST00000467852 TMEM101Q96IK0 257 aa6.44□□□□□ -1.38
VPS26A-204ENST00000467852 BTF3L4Q96K17 158 aa6.44□□□□□ -1.38
VPS26A-204ENST00000467852 AP1S3Q96PC3 154 aa6.44□□□□□ -1.38
VPS26A-204ENST00000467852 MUC21A0A140T8X8 626 aa6.43□□□□□ -1.38
VPS26A-204ENST00000467852 ZNF25P17030 456 aaPredicted RBP6.43□□□□□ -1.38
VPS26A-204ENST00000467852 DEFA3P59666 94 aa6.43□□□□□ -1.38
VPS26A-204ENST00000467852 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
VPS26A-204ENST00000467852 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
VPS26A-204ENST00000467852 MRPL35Q9NZE8 188 aaKnown RBP6.43□□□□□ -1.38
VPS26A-204ENST00000467852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.42□□□□□ -1.38
VPS26A-204ENST00000467852 IGKV2-29A2NJV5 120 aaPredicted RBP6.42□□□□□ -1.38
VPS26A-204ENST00000467852 HMGB3O15347 200 aaKnown RBP6.42□□□□□ -1.38
VPS26A-204ENST00000467852 LRRC37A5PQ49AS3 106 aa6.42□□□□□ -1.38
VPS26A-204ENST00000467852 DEDD2Q8WXF8 326 aa6.42□□□□□ -1.38
VPS26A-204ENST00000467852 NIT2Q9NQR4 276 aa6.42□□□□□ -1.38
VPS26A-204ENST00000467852 NDUFA12Q9UI09 145 aa6.42□□□□□ -1.38
VPS26A-204ENST00000467852 BCE1O60756 84 aa6.41□□□□□ -1.38
VPS26A-204ENST00000467852 ARL14EPLP0DKL9 152 aa6.41□□□□□ -1.38
VPS26A-204ENST00000467852 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
VPS26A-204ENST00000467852 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
VPS26A-204ENST00000467852 Q86TA4 180 aa6.41□□□□□ -1.38
VPS26A-204ENST00000467852 RBM38Q9H0Z9 239 aaKnown RBP6.41□□□□□ -1.38
VPS26A-204ENST00000467852 ZFP30Q9Y2G7 519 aa6.41□□□□□ -1.38
VPS26A-204ENST00000467852 G3V3Q6 166 aa6.4□□□□□ -1.38
VPS26A-204ENST00000467852 SNAI2O43623 268 aa6.4□□□□□ -1.38
VPS26A-204ENST00000467852 NDUFB6O95139 128 aa6.4□□□□□ -1.38
VPS26A-204ENST00000467852 BLOC1S1P78537 153 aa6.4□□□□□ -1.38
VPS26A-204ENST00000467852 TMEM241Q24JQ0 296 aa6.4□□□□□ -1.38
VPS26A-204ENST00000467852 COX8CQ7Z4L0 72 aa6.4□□□□□ -1.38
VPS26A-204ENST00000467852 SMDT1Q9H4I9 107 aa6.4□□□□□ -1.38
VPS26A-204ENST00000467852 F8WDY8 70 aa6.39□□□□□ -1.39
VPS26A-204ENST00000467852 NDUFA1O15239 70 aa6.39□□□□□ -1.39
VPS26A-204ENST00000467852 OR5AL1P0C617 328 aa6.39□□□□□ -1.39
VPS26A-204ENST00000467852 LBHQ53QV2 105 aaPredicted RBP6.39□□□□□ -1.39
VPS26A-204ENST00000467852 APCSP02743 223 aa6.38□□□□□ -1.39
VPS26A-204ENST00000467852 NTF3P20783 257 aa6.38□□□□□ -1.39
VPS26A-204ENST00000467852 SCGB1C1Q8TD33 95 aa6.38□□□□□ -1.39
VPS26A-204ENST00000467852 C1orf196B1AJZ1 125 aa6.37□□□□□ -1.39
VPS26A-204ENST00000467852 NCR2O95944 276 aa6.37□□□□□ -1.39
VPS26A-204ENST00000467852 CXCL1P09341 107 aa6.37□□□□□ -1.39
VPS26A-204ENST00000467852 GCHFRP30047 84 aa6.37□□□□□ -1.39
VPS26A-204ENST00000467852 A0A087WXM4 84 aa6.36□□□□□ -1.39
VPS26A-204ENST00000467852 OR10D4PQ8NGN7 298 aa6.36□□□□□ -1.39
VPS26A-204ENST00000467852 ALG5Q9Y673 324 aa6.36□□□□□ -1.39
VPS26A-204ENST00000467852 PEX7O00628 323 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 STAG3L2P0CL84 134 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 STAG3L3P0CL85 134 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 CTRLP40313 264 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 PYDC2Q56P42 97 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 C5orf38Q86SI9 138 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 C3orf22Q8N5N4 141 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 TMEM167BQ9NRX6 74 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 C6orf48Q9UBA6 75 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 C22orf24Q9Y442 160 aa6.35□□□□□ -1.39
VPS26A-204ENST00000467852 H0YIZ8 118 aa6.34□□□□□ -1.39
VPS26A-204ENST00000467852 CDC34P49427 236 aaPredicted RBP6.34□□□□□ -1.39
VPS26A-204ENST00000467852 UBE2G1P62253 170 aa6.34□□□□□ -1.39
VPS26A-204ENST00000467852 C9orf129Q5T035 196 aaKnown RBP6.34□□□□□ -1.39
VPS26A-204ENST00000467852 UNQ6190/PRO20217Q6UXQ8 127 aa6.34□□□□□ -1.39
VPS26A-204ENST00000467852 CDC42SE2Q9NRR3 84 aa6.34□□□□□ -1.39
VPS26A-204ENST00000467852 A0A1W2PRE2 83 aa6.33□□□□□ -1.4
VPS26A-204ENST00000467852 UBE2AP49459 152 aa6.33□□□□□ -1.4
VPS26A-204ENST00000467852 ORAOV1Q8WV07 137 aa6.33□□□□□ -1.4
VPS26A-204ENST00000467852 HIST1H2BAQ96A08 127 aa6.33□□□□□ -1.4
VPS26A-204ENST00000467852 IL15RAQ13261 267 aa6.32□□□□□ -1.4
VPS26A-204ENST00000467852 FAM19A2Q8N3H0 131 aa6.32□□□□□ -1.4
VPS26A-204ENST00000467852 FMC1Q96HJ9 113 aa6.32□□□□□ -1.4
VPS26A-204ENST00000467852 CYTL1Q9NRR1 136 aa6.32□□□□□ -1.4
VPS26A-204ENST00000467852 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
VPS26A-204ENST00000467852 NAP1L6A6NFF2 107 aa6.31□□□□□ -1.4
VPS26A-204ENST00000467852 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
VPS26A-204ENST00000467852 NDUFC2-KCTD14E9PQ53 114 aa6.3□□□□□ -1.4
VPS26A-204ENST00000467852 CXorf1O96002 111 aa6.3□□□□□ -1.4
VPS26A-204ENST00000467852 SPINK1P00995 79 aa6.3□□□□□ -1.4
VPS26A-204ENST00000467852 LTAP01374 205 aa6.29□□□□□ -1.4
VPS26A-204ENST00000467852 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
VPS26A-204ENST00000467852 NPSP0C0P6 89 aa6.28□□□□□ -1.4
VPS26A-204ENST00000467852 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
VPS26A-204ENST00000467852 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
VPS26A-204ENST00000467852 TPPP3Q9BW30 176 aa6.28□□□□□ -1.4
VPS26A-204ENST00000467852 NKX6-2Q9C056 277 aaPredicted RBP6.28□□□□□ -1.4
VPS26A-204ENST00000467852 TRAV13-1A0A0B4J241 112 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 TRGC1P0CF51 173 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 CNPY1Q3B7I2 92 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 MRPL52Q86TS9 123 aaKnown RBP6.27□□□□□ -1.41
VPS26A-204ENST00000467852 MARVELD1Q9BSK0 173 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 TP73-AS1Q9UF72 201 aa6.27□□□□□ -1.41
VPS26A-204ENST00000467852 PMCHP20382 165 aa6.26□□□□□ -1.41
VPS26A-204ENST00000467852 UBE2G2P60604 165 aa6.26□□□□□ -1.41
VPS26A-204ENST00000467852 SUMO2P61956 95 aaKnown RBP6.26□□□□□ -1.41
VPS26A-204ENST00000467852 SMIM3Q9BZL3 60 aa6.26□□□□□ -1.41
VPS26A-204ENST00000467852 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
VPS26A-204ENST00000467852 I3L3M4 83 aa6.25□□□□□ -1.41
VPS26A-204ENST00000467852 Q8NBF4 154 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms