RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 MYH8P13535 1937 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 MUC4Q99102 2169 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 D6R8Y8 96 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 F8WEM9 126 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 HMGA1P17096 107 aaKnown RBP1.88□□□□□ -2.11
VPS50-209ENST00000467326 Q86TA4 180 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 MUSTN1Q8IVN3 82 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 TTTY12Q9BZ98 90 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 NMES1Q9C002 83 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 WFDC10AQ9H1F0 79 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 TMEM14BQ9NUH8 114 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 HILPDAQ9Y5L2 63 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 DOCK1Q14185 1865 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 RALGAPBQ86X10 1494 aa1.88□□□□□ -2.11
VPS50-209ENST00000467326 CFAP43Q8NDM7 1665 aa1.87□□□□□ -2.11
VPS50-209ENST00000467326 FREM3P0C091 2139 aa1.87□□□□□ -2.11
VPS50-209ENST00000467326 IGLV3-1P01715 115 aa1.87□□□□□ -2.11
VPS50-209ENST00000467326 RNASE3P12724 160 aaKnown RBP1.87□□□□□ -2.11
VPS50-209ENST00000467326 CDC42SE2Q9NRR3 84 aa1.87□□□□□ -2.11
VPS50-209ENST00000467326 RGPD3A6NKT7 1758 aaPredicted RBP1.87□□□□□ -2.11
VPS50-209ENST00000467326 RGPD8O14715 1765 aaPredicted RBP1.87□□□□□ -2.11
VPS50-209ENST00000467326 RGPD5Q99666 1765 aa1.87□□□□□ -2.11
VPS50-209ENST00000467326 PLXNA4Q9HCM2 1894 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 ANKRD50Q9ULJ7 1429 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 A0A1B0GUL6 1792 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 LOC101927531A0A1B0GV80 90 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 NDUFB1O75438 58 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 PPP1R17O96001 155 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 ARMS2P0C7Q2 107 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 Q5VV11 94 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 SFTA2Q6UW10 78 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 LINC00322Q6ZN03 302 aaPredicted RBP1.86□□□□□ -2.11
VPS50-209ENST00000467326 COA5Q86WW8 74 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 COX7B2Q8TF08 81 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 CYSTM1Q9H1C7 97 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 NDUFA4L2Q9NRX3 87 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 SNURFQ9Y675 71 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 R4GMQ9 66 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 LRRC37A3O60309 1634 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 COL4A5P29400 1685 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 NEXMIFQ5QGS0 1516 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 KIAA0586Q9BVV6 1533 aa1.86□□□□□ -2.11
VPS50-209ENST00000467326 KIAA1549Q9HCM3 1950 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 ZFHX2Q9C0A1 2572 aaPredicted RBP1.85□□□□□ -2.11
VPS50-209ENST00000467326 HMGN4O00479 90 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 CCL3L1P16619 93 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 RPL37AP61513 92 aaKnown RBP1.85□□□□□ -2.11
VPS50-209ENST00000467326 SPAG11BQ08648 103 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 SPAG11AQ6PDA7 123 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 BPESC1Q9GZL8 116 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 PSENENQ9NZ42 101 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 ABRACLQ9P1F3 81 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 UBE2D4Q9Y2X8 147 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 ATP7BP35670 1465 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 TET3O43151 1660 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 ZNF142P52746 1687 aaPredicted RBP1.85□□□□□ -2.11
VPS50-209ENST00000467326 PLXNA2O75051 1894 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 ARHGAP32A7KAX9 2087 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 KIAA2026Q5HYC2 2103 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 ITSN1Q15811 1721 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 SEC16AO15027 2179 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 MUC22E2RYF6 1773 aaPredicted RBP1.85□□□□□ -2.11
VPS50-209ENST00000467326 MAST1Q9Y2H9 1570 aa1.85□□□□□ -2.11
VPS50-209ENST00000467326 TOP2BQ02880 1626 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 RAPGEF6Q8TEU7 1601 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 TRPM7Q96QT4 1865 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 RGPD1P0DJD0 1748 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 FAM223BA6NKX1 122 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 INE1O15225 51 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 HCP5Q6MZN7 132 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 SMIM4Q8WVI0 70 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 V9GYV3 84 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 DIDO1Q9BTC0 2240 aaKnown RBP1.84□□□□□ -2.11
VPS50-209ENST00000467326 ABCC6O95255 1503 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 EHBP1L1Q8N3D4 1523 aa1.84□□□□□ -2.11
VPS50-209ENST00000467326 GLI2P10070 1586 aa1.84□□□□□ -2.12
VPS50-209ENST00000467326 HIVEP2P31629 2446 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 EML5Q05BV3 1969 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 COL4A2P08572 1712 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 RGPD2P0DJD1 1756 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 MAP2P11137 1827 aaKnown RBP1.83□□□□□ -2.12
VPS50-209ENST00000467326 PATJQ8NI35 1801 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 A0A1B0GUT8 65 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 M0R2N4 97 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 SPINT3P49223 89 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 DEFB132Q7Z7B7 95 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 LINC00304Q8N9R0 145 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 KIF1AQ12756 1690 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 ADAMTS7Q9UKP4 1686 aa1.83□□□□□ -2.12
VPS50-209ENST00000467326 XRN1Q8IZH2 1706 aaKnown RBP1.83□□□□□ -2.12
VPS50-209ENST00000467326 HEATR5BQ9P2D3 2071 aa1.82□□□□□ -2.12
VPS50-209ENST00000467326 CPS1P31327 1500 aa1.82□□□□□ -2.12
VPS50-209ENST00000467326 IGKV2-40A0A087WW87 121 aaPredicted RBP1.82□□□□□ -2.12
VPS50-209ENST00000467326 CLPSL1A2RUU4 121 aa1.82□□□□□ -2.12
VPS50-209ENST00000467326 F8VRH5 84 aa1.82□□□□□ -2.12
VPS50-209ENST00000467326 IGKV2D-40P01614 121 aaPredicted RBP1.82□□□□□ -2.12
VPS50-209ENST00000467326 IGKV4-1P06312 121 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms