RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 SPCS1Q9Y6A9 102 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 V9GYH0 126 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 CACNA1AO00555 2505 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 HECTD4Q9Y4D8 3996 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 VWFP04275 2813 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 MUC12Q9UKN1 5478 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 TNXBP22105 4242 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 PPRC1Q5VV67 1664 aaKnown RBP-0.21□□□□□ -2.44
ATG3-204ENST00000467275 KIF21AQ7Z4S6 1674 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 LRP2P98164 4655 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 KRTAP6-1Q3LI64 71 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 Q5VSD8 79 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 C1orf54Q8WWF1 131 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 PPP3R2Q96LZ3 170 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 NDUFA4L2Q9NRX3 87 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 PKD1L1Q8TDX9 2849 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 NAIPQ13075 1403 aa-0.21□□□□□ -2.44
ATG3-204ENST00000467275 BCL9LQ86UU0 1499 aa-0.22□□□□□ -2.44
ATG3-204ENST00000467275 TRBV7-3A0A075B6L6 115 aa-0.22□□□□□ -2.44
ATG3-204ENST00000467275 APOC2P02655 101 aa-0.22□□□□□ -2.44
ATG3-204ENST00000467275 BAGE2Q86Y30 109 aa-0.22□□□□□ -2.44
ATG3-204ENST00000467275 Q8IZM0 81 aa-0.22□□□□□ -2.44
ATG3-204ENST00000467275 MGST2Q99735 147 aa-0.22□□□□□ -2.44
ATG3-204ENST00000467275 CPSF1Q10570 1443 aaKnown RBP-0.22□□□□□ -2.45
ATG3-204ENST00000467275 TENM4Q6N022 2769 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 MIF4GDA9UHW6 222 aaKnown RBP-0.23□□□□□ -2.45
ATG3-204ENST00000467275 F8VRH5 84 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 S100A3P33764 101 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 CATR1Q13166 79 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 DEFB109BQ30KR1 87 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 TMEM170BQ5T4T1 132 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 C8orf59Q8N0T1 100 aaPredicted RBP-0.23□□□□□ -2.45
ATG3-204ENST00000467275 TSLPQ969D9 159 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 DYNLRB1Q9NP97 96 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 LINC01558Q9Y6Z2 57 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 FLNCQ14315 2725 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 ERCC6L2Q5T890 1561 aa-0.23□□□□□ -2.45
ATG3-204ENST00000467275 RIMS1Q86UR5 1692 aaKnown RBP-0.24□□□□□ -2.45
ATG3-204ENST00000467275 QRICH2Q9H0J4 1663 aa-0.24□□□□□ -2.45
ATG3-204ENST00000467275 ROBO1Q9Y6N7 1651 aa-0.24□□□□□ -2.45
ATG3-204ENST00000467275 SPTBN1Q01082 2364 aaKnown RBP-0.24□□□□□ -2.45
ATG3-204ENST00000467275 I3L2K1 104 aa-0.24□□□□□ -2.45
ATG3-204ENST00000467275 UQCR11O14957 56 aa-0.24□□□□□ -2.45
ATG3-204ENST00000467275 COX17Q14061 63 aa-0.24□□□□□ -2.45
ATG3-204ENST00000467275 TP53AIP1Q9HCN2 124 aa-0.24□□□□□ -2.45
ATG3-204ENST00000467275 IGLC7A0M8Q6 106 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 SSSCA1O60232 199 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 IFNGP01579 166 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 SPRR1AP35321 89 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 TPPP2P59282 170 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 COMMD6Q7Z4G1 85 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 C5orf38Q86SI9 138 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 PP6455Q8WZ26 134 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 BTAF1O14981 1849 aa-0.25□□□□□ -2.45
ATG3-204ENST00000467275 GOLGA4Q13439 2230 aaKnown RBP-0.26□□□□□ -2.45
ATG3-204ENST00000467275 SHROOM2Q13796 1616 aa-0.26□□□□□ -2.45
ATG3-204ENST00000467275 HMGN4O00479 90 aa-0.26□□□□□ -2.45
ATG3-204ENST00000467275 AKAIN1P0CW23 69 aa-0.26□□□□□ -2.45
ATG3-204ENST00000467275 Q6JHZ5 121 aa-0.26□□□□□ -2.45
ATG3-204ENST00000467275 LINC00474Q9P2X8 69 aa-0.26□□□□□ -2.45
ATG3-204ENST00000467275 CHD6Q8TD26 2715 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 PTPN13Q12923 2485 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 A2ML1A8K2U0 1454 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 C10orf71Q711Q0 1435 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 OOSP1A8MZH6 123 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 APOC3P02656 99 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 NSD1Q96L73 2696 aaPredicted RBP-0.27□□□□□ -2.45
ATG3-204ENST00000467275 NALCNQ8IZF0 1738 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 PAPPAQ13219 1627 aa-0.27□□□□□ -2.45
ATG3-204ENST00000467275 CSPG4Q6UVK1 2322 aa-0.28□□□□□ -2.45
ATG3-204ENST00000467275 LOC285095A0A1B0GVY8 99 aa-0.28□□□□□ -2.45
ATG3-204ENST00000467275 TNFP01375 233 aa-0.28□□□□□ -2.45
ATG3-204ENST00000467275 DCDP81605 110 aaKnown RBP-0.28□□□□□ -2.45
ATG3-204ENST00000467275 MYOM1P52179 1685 aa-0.28□□□□□ -2.45
ATG3-204ENST00000467275 RAPGEF6Q8TEU7 1601 aa-0.28□□□□□ -2.45
ATG3-204ENST00000467275 ROCK2O75116 1388 aaKnown RBP-0.29□□□□□ -2.46
ATG3-204ENST00000467275 SPRR2DP22532 72 aa-0.29□□□□□ -2.46
ATG3-204ENST00000467275 RPL13AP3Q6NVV1 102 aa-0.29□□□□□ -2.46
ATG3-204ENST00000467275 CUL7Q14999 1698 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 TRBV6-1A0A0K0K1D8 114 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 EFCAB10A6NFE3 127 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 SFT2D2O95562 160 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 PRM1P04553 51 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 PIGYQ3MUY2 71 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 MRPL54Q6P161 138 aaKnown RBP-0.3□□□□□ -2.46
ATG3-204ENST00000467275 MYOZ3Q8TDC0 251 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 TSC2P49815 1807 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 SHANK2Q9UPX8 1470 aa-0.3□□□□□ -2.46
ATG3-204ENST00000467275 MUC2Q02817 5179 aa-0.31□□□□□ -2.46
ATG3-204ENST00000467275 KTN1Q86UP2 1357 aaKnown RBP-0.31□□□□□ -2.46
ATG3-204ENST00000467275 SPRR4Q96PI1 79 aa-0.31□□□□□ -2.46
ATG3-204ENST00000467275 DPH3P1Q9H4G8 78 aa-0.31□□□□□ -2.46
ATG3-204ENST00000467275 CDC42SE2Q9NRR3 84 aa-0.31□□□□□ -2.46
ATG3-204ENST00000467275 ARHGEF5Q12774 1597 aa-0.32□□□□□ -2.46
ATG3-204ENST00000467275 UBE2L5PA0A1B0GUS4 154 aa-0.32□□□□□ -2.46
ATG3-204ENST00000467275 CHKB-CPT1BH3BT56 60 aa-0.32□□□□□ -2.46
ATG3-204ENST00000467275 DLEU1O43261 78 aa-0.32□□□□□ -2.46
ATG3-204ENST00000467275 UBE2L3P68036 154 aaKnown RBP-0.32□□□□□ -2.46
ATG3-204ENST00000467275 C9orf153Q5TBE3 101 aa-0.32□□□□□ -2.46
ATG3-204ENST00000467275 SMG6Q86US8 1419 aaKnown RBP-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms