RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 SMIM17P0DL12 118 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 NTF3P20783 257 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 NKX2-5P52952 324 aaPredicted RBP2.43□□□□□ -2.02
MSL3-209ENST00000467141 RPS20P60866 119 aaKnown RBP2.43□□□□□ -2.02
MSL3-209ENST00000467141 CACNG7P62955 275 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 REG3AQ06141 175 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 GAGE6Q13070 117 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 C14orf177Q52M58 125 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 TMEM97Q5BJF2 176 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 EIF5AL1Q6IS14 154 aaKnown RBP2.43□□□□□ -2.02
MSL3-209ENST00000467141 KCNIP4Q6PIL6 250 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 RASL11AQ6T310 242 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 LYZL1Q6UWQ5 148 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 LINC00269Q8N2A0 174 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 DEFB104AQ8WTQ1 72 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 GTSF1Q8WW33 167 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 PGLYRP4Q96LB8 373 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 CNFNQ9BYD5 112 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 GFRA4Q9GZZ7 299 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 RNASE7Q9H1E1 156 aaKnown RBP2.43□□□□□ -2.02
MSL3-209ENST00000467141 DPH3P1Q9H4G8 78 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 MED9Q9NWA0 146 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 HMCN2Q8NDA2 5059 aa2.43□□□□□ -2.02
MSL3-209ENST00000467141 TNXBP22105 4242 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 IGLV10-54A0A075B6I4 117 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 TRAV26-2A0A0B4J265 109 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 IGHV1-24A0A0C4DH33 117 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 F2Z2F3 143 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 H7C1H1 209 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 HNRNPA3P51991 378 aaKnown RBP2.42□□□□□ -2.02
MSL3-209ENST00000467141 PKIAP61925 76 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 ALKAL2Q6UX46 152 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 C9orf163Q8N9P6 203 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.42□□□□□ -2.02
MSL3-209ENST00000467141 GATD1Q8NB37 220 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 LYPD6BQ8NI32 183 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 OCC1Q8TAD7 63 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 RPL39LQ96EH5 51 aaKnown RBP2.42□□□□□ -2.02
MSL3-209ENST00000467141 RPP21Q9H633 154 aaKnown RBP2.42□□□□□ -2.02
MSL3-209ENST00000467141 NIT2Q9NQR4 276 aa2.42□□□□□ -2.02
MSL3-209ENST00000467141 XKRY2A2RUG3 117 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 TMEM250H0YL14 139 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 TAGLN2P37802 199 aaKnown RBP2.41□□□□□ -2.02
MSL3-209ENST00000467141 FOXA3P55318 350 aaPredicted RBP2.41□□□□□ -2.02
MSL3-209ENST00000467141 CNBPP62633 177 aaKnown RBP2.41□□□□□ -2.02
MSL3-209ENST00000467141 CIRBPQ14011 172 aaKnown RBP2.41□□□□□ -2.02
MSL3-209ENST00000467141 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 FAM231DQ6ZW35 169 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 AKAP14Q86UN6 197 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 C15orf56Q8N910 161 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 TMEM243Q9BU79 118 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 BIN3Q9NQY0 253 aa2.41□□□□□ -2.02
MSL3-209ENST00000467141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.4□□□□□ -2.03
MSL3-209ENST00000467141 TRAV8-4A0A0B4J246 113 aa2.4□□□□□ -2.03
MSL3-209ENST00000467141 IGKV2-29A2NJV5 120 aaPredicted RBP2.4□□□□□ -2.03
MSL3-209ENST00000467141 SDHAF1A6NFY7 115 aa2.4□□□□□ -2.03
MSL3-209ENST00000467141 UBE2L6O14933 153 aa2.4□□□□□ -2.03
MSL3-209ENST00000467141 GATCO43716 136 aaKnown RBP2.4□□□□□ -2.03
MSL3-209ENST00000467141 CHTF8P0CG12 524 aa2.4□□□□□ -2.03
MSL3-209ENST00000467141 COTL1Q14019 142 aa2.4□□□□□ -2.03
MSL3-209ENST00000467141 SDIM1Q6ZPB5 146 aa2.4□□□□□ -2.03
MSL3-209ENST00000467141 LINC01551Q86U37 167 aa2.4□□□□□ -2.03
MSL3-209ENST00000467141 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 IGKV3OR2-268A0A0C4DH90 116 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 TRBV6-5A0A0K0K1A5 114 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 A0A1B0GVG6 124 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 FAM231BA6NCW3 169 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 HIGD1CA8MV81 97 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 A8MWL6 223 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 NCR2O95944 276 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 TSHBP01222 138 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 APCSP02743 223 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 SRP19P09132 144 aaKnown RBP2.39□□□□□ -2.03
MSL3-209ENST00000467141 FGF6P10767 208 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 ESDP10768 282 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 RPS10P46783 165 aaKnown RBP2.39□□□□□ -2.03
MSL3-209ENST00000467141 CEBPGP53567 150 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 RPL37AP61513 92 aaKnown RBP2.39□□□□□ -2.03
MSL3-209ENST00000467141 HIGD2BQ4VC39 106 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
MSL3-209ENST00000467141 RNF185Q96GF1 192 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 FAM210AQ96ND0 272 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 SMIM7Q9BQ49 75 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 TMEM242Q9NWH2 141 aa2.39□□□□□ -2.03
MSL3-209ENST00000467141 IGHV3-64A0A075B6Q5 118 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 GVQW2A0A096LPI5 108 aaPredicted RBP2.38□□□□□ -2.03
MSL3-209ENST00000467141 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.38□□□□□ -2.03
MSL3-209ENST00000467141 TRBV27A0A0K0K1C4 114 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 A0A1B0GUT8 65 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 GAGE10A6NGK3 116 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 ZNF727A8MUV8 499 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 SMKR1H3BMG3 65 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 H7C423 109 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 I3L3M4 83 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 NDUFS6O75380 124 aaKnown RBP2.38□□□□□ -2.03
MSL3-209ENST00000467141 OXTP01178 125 aa2.38□□□□□ -2.03
MSL3-209ENST00000467141 MT1HL1P0DM35 61 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms