RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 CDC42SE2Q9NRR3 84 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 UQCR10Q9UDW1 63 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 CHD1O14646 1710 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 ZNF462Q96JM2 2506 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 CCNB3Q8WWL7 1395 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 ABCC10Q5T3U5 1492 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 LOC285095A0A1B0GVY8 99 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 M0R143 59 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 MT-ATP8P03928 68 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 S100A8P05109 93 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 UBE2D3P61077 147 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 UBE2D2P62837 147 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 KRTAP19-3Q7Z4W3 81 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 BAGE2Q86Y30 109 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 FAM223AQ8IWN6 122 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 SMIM4Q8WVI0 70 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 DOCK11Q5JSL3 2073 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 KMT2DO14686 5537 aa0.39□□□□□ -2.35
GTF3C3-209ENST00000466862 ZNF609O15014 1411 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 EHBP1L1Q8N3D4 1523 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 SCN7AQ01118 1682 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 GNGT2O14610 69 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 UQCR11O14957 56 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 PIN1P1O15428 100 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 SFT2D2O95562 160 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 APOC3P02656 99 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 KRTDAPP60985 99 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 SEC11AP67812 179 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 TMEM170BQ5T4T1 132 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 UBE2DNLQ8IWF7 75 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 LINC00472Q9H8W2 130 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 PLAC8Q9NZF1 115 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 PRO1854Q9UHT4 67 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 LINC01558Q9Y6Z2 57 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 ARL2-SNX15V9GYD0 113 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 PI4KAP42356 2102 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 TCHHQ07283 1943 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 HMGXB3Q12766 1538 aa0.38□□□□□ -2.35
GTF3C3-209ENST00000466862 UNC13BO14795 1591 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 DIP2CQ9Y2E4 1556 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 FYCO1Q9BQS8 1478 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 MEGF8Q7Z7M0 2845 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 FAM223BA6NKX1 122 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 ZNF815PA8K554 130 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 M0R3E3 92 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 COX6CP09669 75 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 IGLC1P0CG04 106 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 TRAPPC2P0DI81 140 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 TRAPPC2BP0DI82 140 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 PKIAP61925 76 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 HAMPP81172 84 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 COX17Q14061 63 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 SSBP3-AS1Q7Z2R9 100 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 PMCHL2Q9BQD1 86 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 SNHG12Q9BXW3 62 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 NXT2Q9NPJ8 142 aaKnown RBP0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 AP4S1Q9Y587 144 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 AKAP12Q02952 1782 aa0.37□□□□□ -2.35
GTF3C3-209ENST00000466862 SMARCA2P51531 1590 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 GAPVD1Q14C86 1478 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 TEX14Q8IWB6 1497 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 LRRC37A2A6NM11 1700 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 ANKRD26Q9UPS8 1709 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 ANKRD36BQ8N2N9 1353 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 LRP6O75581 1613 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 A0A0G2JND7 137 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 C10orf142B7Z368 130 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 UBA52P62987 128 aaKnown RBP0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 COX6A2Q02221 97 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 COL5A1-AS1Q5SY13 56 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 Q6JHZ5 121 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 DPY30Q9C005 99 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 FAIMQ9NVQ4 179 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 PRDM15P57071 1507 aaPredicted RBP0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 BTAF1O14981 1849 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 SBF2Q86WG5 1849 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 MYO7AQ13402 2215 aa0.36□□□□□ -2.35
GTF3C3-209ENST00000466862 ZFHX3Q15911 3703 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 COL4A6Q14031 1691 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 MGPP08493 103 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 LINC00032P0C843 101 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 ASIPP42127 132 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 VAMP8Q9BV40 100 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 ADGRL2O95490 1459 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 MLH3Q9UHC1 1453 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 LAMC1P11047 1609 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 RAPGEF6Q8TEU7 1601 aa0.35□□□□□ -2.35
GTF3C3-209ENST00000466862 KDM3BQ7LBC6 1761 aa0.34□□□□□ -2.35
GTF3C3-209ENST00000466862 CADP27708 2225 aa0.34□□□□□ -2.35
GTF3C3-209ENST00000466862 KCPQ6ZWJ8 1503 aa0.34□□□□□ -2.35
GTF3C3-209ENST00000466862 ATOX1O00244 68 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 NDUFC1O43677 76 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 BCE1O60756 84 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 PRH1P02810 166 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 S100A3P33764 101 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms