RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 Q8N6K4 173 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 TMEM141Q96I45 108 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 R4GMQ9 66 aa2.12□□□□□ -2.07
VPS13D-203ENST00000466732 MUC22E2RYF6 1773 aaPredicted RBP2.11□□□□□ -2.07
VPS13D-203ENST00000466732 ARFGEF3Q5TH69 2177 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 INTS1Q8N201 2190 aaKnown RBP2.11□□□□□ -2.07
VPS13D-203ENST00000466732 IGHV5-51A0A0C4DH38 117 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 IGKV3D-7A0A0C4DH55 119 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 A0A1B0GUT8 65 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 hDV103S1A0JD37 113 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 C16orf90A8MZG2 172 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 F8VRH5 84 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 GNRH2O43555 120 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 COX6B1P14854 86 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 ZNF137PP52743 207 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 LY6EQ16553 131 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 ASB16-AS1Q495Z4 193 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 LINC00483Q53H64 154 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 ORMDL3Q8N138 153 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 LYPD1Q8N2G4 141 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 CCL4L1Q8NHW4 92 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 UBALD1Q8TB05 177 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 RMI2Q96E14 147 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 CYP4F30PQ9H0H9 118 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 NDUFA12Q9UI09 145 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 ICOSQ9Y6W8 199 aa2.11□□□□□ -2.07
VPS13D-203ENST00000466732 A0A087WVE0 104 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 TRAV22A0A0B4J277 110 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 C3orf84H3BNL1 204 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 H3BSH0 61 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 M0R135 149 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 DNAL4O96015 105 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 CD24P25063 80 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 EDDM3BP56851 147 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 RPS21P63220 83 aaKnown RBP2.1□□□□□ -2.07
VPS13D-203ENST00000466732 CAMK2N1Q7Z7J9 78 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 FAM167A-AS1Q96KT0 104 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 CCL28Q9NRJ3 127 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 DEC1Q9P2X7 70 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 MUC4Q99102 2169 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 SHANK1Q9Y566 2161 aa2.1□□□□□ -2.07
VPS13D-203ENST00000466732 FREM1Q5H8C1 2179 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 DOCK10Q96BY6 2186 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 CACNA1CQ13936 2221 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 IGLV3-12A0A075B6K2 115 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 IGLV3-9A0A075B6K5 115 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 IGHV1-45A0A0A0MS14 117 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 D6R8Y8 96 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 C5orf67F2Z3F1 127 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 C19orf84I3L1E1 186 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 NDUFA3O95167 84 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 RPL28P46779 137 aaKnown RBP2.09□□□□□ -2.07
VPS13D-203ENST00000466732 IGFL1Q6UW32 110 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 KLF14Q8TD94 323 aaPredicted RBP2.09□□□□□ -2.07
VPS13D-203ENST00000466732 SNURFQ9Y675 71 aa2.09□□□□□ -2.07
VPS13D-203ENST00000466732 MED13Q9UHV7 2174 aa2.09□□□□□ -2.08
VPS13D-203ENST00000466732 PRR14LQ5THK1 2151 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 A0A0J9YX75 114 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 TRBV6-1A0A0K0K1D8 114 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 A0A1B0GW54 56 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 SDHAF1A6NFY7 115 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 H7C2G1 150 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 LEPROTO15243 131 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 BAALC-AS2P0C853 105 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 DEFA4P12838 97 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 BSPH1Q075Z2 132 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 Q5VV11 94 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 MIR17HGQ75NE6 70 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 LIMD2Q9BT23 127 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 TMEM14BQ9NUH8 114 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 PI4KAP42356 2102 aa2.08□□□□□ -2.08
VPS13D-203ENST00000466732 TNRC6BQ9UPQ9 1833 aaKnown RBP2.07□□□□□ -2.08
VPS13D-203ENST00000466732 IGKV1-12A0A0C4DH73 117 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 TRBV7-4A0A0J9YYF1 115 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 CHKB-CPT1BH3BT56 60 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 I3L3M4 83 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 IGKV1D-12P01611 117 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 ARMS2P0C7Q2 107 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 C9orf116Q5BN46 136 aaPredicted RBP2.07□□□□□ -2.08
VPS13D-203ENST00000466732 OBSCN-AS1Q96MR7 158 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 LINC00846Q9NV44 126 aa2.07□□□□□ -2.08
VPS13D-203ENST00000466732 IGKV1D-42A0A075B6H8 117 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 TRBV6-8A0A0A6YYG3 113 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 IGIPA6NJ69 53 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 C10orf142B7Z368 130 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 M0R1W7 72 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 PSCAO43653 123 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 IGKV1-39P01597 117 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 IGLV3-1P01715 115 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 IGKV1D-39P04432 117 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 RPL27AP46776 148 aaKnown RBP2.06□□□□□ -2.08
VPS13D-203ENST00000466732 FXYD7P58549 80 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 REG3AQ06141 175 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 MUSTN1Q8IVN3 82 aa2.06□□□□□ -2.08
VPS13D-203ENST00000466732 Q8IYB0 196 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms