RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 LENEPQ9Y5L5 61 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 R4GMQ9 66 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 CHKB-CPT1BH3BT56 60 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 H7BZZ5 65 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 TMEM170BQ5T4T1 132 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 PMCHL2Q9BQD1 86 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 WFDC6Q9BQY6 131 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 PRO1933Q9H354 126 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 DYNLRB1Q9NP97 96 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 TMEM14BQ9NUH8 114 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 PI4KAP42356 2102 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 LAMA4Q16363 1823 aa1.01□□□□□ -2.25
CDC42BPA-211ENST00000466538 CLTCQ00610 1675 aaKnown RBP1□□□□□ -2.25
CDC42BPA-211ENST00000466538 MYO3AQ8NEV4 1616 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 SSC5DA1L4H1 1573 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 ZMYM4Q5VZL5 1548 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 MLH3Q9UHC1 1453 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 NRXN1Q9ULB1 1477 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 A0A096LNT2 108 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 NDUFC1O43677 76 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 SFT2D2O95562 160 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 TRAPPC2P0DI81 140 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 TRAPPC2BP0DI82 140 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 SPAG11BQ08648 103 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 SPINK13Q1W4C9 94 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 SPAG11AQ6PDA7 123 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 Q8N6K4 173 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 AMELXQ99217 191 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 C20orf78Q9BR46 151 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 FAIMQ9NVQ4 179 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 CNTRLQ7Z7A1 2325 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 KIF21AQ7Z4S6 1674 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 DIP2BQ9P265 1576 aa1□□□□□ -2.25
CDC42BPA-211ENST00000466538 POLA1P09884 1462 aaPredicted RBP0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 CCDC18Q5T9S5 1454 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 F2Z2F3 143 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 ATOX1O00244 68 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 HMGN4O00479 90 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 COX6CP09669 75 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 FAUP35544 74 aaKnown RBP0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 ASIPP42127 132 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 FXYD6P3P58550 94 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 VMO1Q7Z5L0 202 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 V9GYH0 126 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 ABCA1O95477 2261 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 ASCC3Q8N3C0 2202 aaKnown RBP0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 FANCAO15360 1455 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 MAGI2Q86UL8 1455 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 BTAF1O14981 1849 aa0.99□□□□□ -2.25
CDC42BPA-211ENST00000466538 MYO7BQ6PIF6 2116 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 NUP188Q5SRE5 1749 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 CTXND1A0A1B0GTU2 59 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 GYPAP02724 150 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 C6orf52Q5T4I8 152 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 BAGE3Q86Y29 109 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 SERP2Q8N6R1 65 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 LCN9Q8WX39 176 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 PRO1854Q9UHT4 67 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 UNC13BO14795 1591 aa0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 PDCD11Q14690 1871 aaKnown RBP0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 EPRSP07814 1512 aaKnown RBP0.98□□□□□ -2.25
CDC42BPA-211ENST00000466538 F8VRH5 84 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 K7EIL1 84 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 K7EP34 96 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 APOC3P02656 99 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 NMBP08949 121 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 ACYP2P14621 99 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 TDRG1Q3Y452 100 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 TRGV9Q99603 122 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 CACFD1Q9UGQ2 172 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 NLRP1Q9C000 1473 aa0.97□□□□□ -2.25
CDC42BPA-211ENST00000466538 LRRIQ1Q96JM4 1722 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 UQCRHLA0A096LP55 91 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 TRGV1A0A0A0MS02 117 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 SYS1-DBNDD2H3BUS1 97 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 M0R135 149 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 LY6G6CO95867 125 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 PMCHL1Q16048 86 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 SFTA2Q6UW10 78 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 SMIM4Q8WVI0 70 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 PLAC4Q8WY50 150 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 LINC00472Q9H8W2 130 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 ARL2-SNX15V9GYD0 113 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 TMEM131LA2VDJ0 1609 aa0.96□□□□□ -2.26
CDC42BPA-211ENST00000466538 F5P12259 2224 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 TRAV1-2A0A0B4J238 106 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 IGLC7A0M8Q6 106 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 TMEM14DPA8MWL7 114 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 UQCR11O14957 56 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 ZNF137PP52743 207 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 SMIM11AP58511 58 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 RPL37P61927 97 aaKnown RBP0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 BAGE2Q86Y30 109 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 NXT2Q9NPJ8 142 aaKnown RBP0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 KIF14Q15058 1648 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 NHSL1Q5SYE7 1610 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 MAP3K4Q9Y6R4 1608 aa0.95□□□□□ -2.26
CDC42BPA-211ENST00000466538 MAP3K1Q13233 1512 aa0.94□□□□□ -2.26
CDC42BPA-211ENST00000466538 KDM5DQ9BY66 1539 aa0.94□□□□□ -2.26
CDC42BPA-211ENST00000466538 ATP10BO94823 1461 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms