RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 A0A1W2PPM0 123 aa14.04□□□□□ -0.16
POLR2J3-203ENST00000464525 RRN3P1Q2M238 152 aa14.04□□□□□ -0.16
POLR2J3-203ENST00000464525 C12orf74Q32Q52 190 aa14.04□□□□□ -0.16
POLR2J3-203ENST00000464525 C16orf74Q96GX8 76 aa14.04□□□□□ -0.16
POLR2J3-203ENST00000464525 A0A0J9YY99 117 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 GAGE12JA6NER3 117 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 K7EQD1 137 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 GAGE4Q13068 117 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 GAGE5Q13069 117 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 SRSF9Q13242 221 aaKnown RBP eCLIP14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 GAGE13Q4V321 117 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 SAMD5Q5TGI4 173 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 C1QTNF4Q9BXJ3 329 aa14.03□□□□□ -0.16
POLR2J3-203ENST00000464525 LINC00694P0DN24 101 aa14.02□□□□□ -0.16
POLR2J3-203ENST00000464525 LOC100131303A0A0U1RQF7 123 aa14.02□□□□□ -0.17
POLR2J3-203ENST00000464525 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.17
POLR2J3-203ENST00000464525 TRAV8-3A0A0A6YYJ7 113 aa14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 A0A1B0GV72 72 aa14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 NTM-AS1Q6ZSK4 140 aa14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 SPANXA1Q9NS26 97 aa14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 MRPS36P82909 103 aaKnown RBP14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 RPL36AP83881 106 aaKnown RBP14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 C3orf56Q8N813 242 aa14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 RPL36ALQ969Q0 106 aaKnown RBP14.01□□□□□ -0.17
POLR2J3-203ENST00000464525 LEPROTO15243 131 aa14□□□□□ -0.17
POLR2J3-203ENST00000464525 INSL3P51460 131 aa14□□□□□ -0.17
POLR2J3-203ENST00000464525 SPCS1Q9Y6A9 102 aa13.99□□□□□ -0.17
POLR2J3-203ENST00000464525 A8MZ25 164 aa13.99□□□□□ -0.17
POLR2J3-203ENST00000464525 K7EP34 96 aa13.99□□□□□ -0.17
POLR2J3-203ENST00000464525 CRYBA4P53673 196 aa13.99□□□□□ -0.17
POLR2J3-203ENST00000464525 IGLL5B9A064 214 aa13.98□□□□□ -0.17
POLR2J3-203ENST00000464525 FABP2P12104 132 aa13.98□□□□□ -0.17
POLR2J3-203ENST00000464525 UBE2D3P61077 147 aa13.98□□□□□ -0.17
POLR2J3-203ENST00000464525 UBE2D2P62837 147 aa13.98□□□□□ -0.17
POLR2J3-203ENST00000464525 COL6A5A8TX70 2615 aa13.97□□□□□ -0.17
POLR2J3-203ENST00000464525 TRBV10-1A0A0K0K1A3 114 aa13.97□□□□□ -0.17
POLR2J3-203ENST00000464525 IGHV3-30-3P0DP02 117 aa13.97□□□□□ -0.17
POLR2J3-203ENST00000464525 DGAT2L7PQ6IED9 249 aa13.97□□□□□ -0.17
POLR2J3-203ENST00000464525 OVOL2Q9BRP0 275 aa13.97□□□□□ -0.17
POLR2J3-203ENST00000464525 GTF2H5Q6ZYL4 71 aa13.97□□□□□ -0.17
POLR2J3-203ENST00000464525 SPINK8P0C7L1 97 aa13.96□□□□□ -0.18
POLR2J3-203ENST00000464525 WFDC9Q8NEX5 89 aa13.96□□□□□ -0.18
POLR2J3-203ENST00000464525 OR5A1Q8NGJ0 315 aa13.96□□□□□ -0.18
POLR2J3-203ENST00000464525 TIMM21Q9BVV7 248 aa13.96□□□□□ -0.18
POLR2J3-203ENST00000464525 DEFB130BP0DP73 79 aa13.95□□□□□ -0.18
POLR2J3-203ENST00000464525 DEFB130AP0DP74 79 aa13.95□□□□□ -0.18
POLR2J3-203ENST00000464525 C10orf126Q8N4M7 172 aa13.95□□□□□ -0.18
POLR2J3-203ENST00000464525 TRGV4A0A0C4DH28 118 aa13.95□□□□□ -0.18
POLR2J3-203ENST00000464525 TINCRA0A1B0GVN0 87 aa13.94□□□□□ -0.18
POLR2J3-203ENST00000464525 A0A1B0GWB2 263 aa13.94□□□□□ -0.18
POLR2J3-203ENST00000464525 UBE2D1P51668 147 aa13.94□□□□□ -0.18
POLR2J3-203ENST00000464525 DAZ4Q86SG3 579 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-203ENST00000464525 DAZ3Q9NR90 486 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-203ENST00000464525 IGHV3-30P01768 117 aa13.93□□□□□ -0.18
POLR2J3-203ENST00000464525 IGHV3-30-5P0DP03 117 aa13.93□□□□□ -0.18
POLR2J3-203ENST00000464525 HERV-K104P63124 156 aa13.93□□□□□ -0.18
POLR2J3-203ENST00000464525 COX6A2Q02221 97 aa13.93□□□□□ -0.18
POLR2J3-203ENST00000464525 CDKN2A-AS1Q9UH64 79 aa13.93□□□□□ -0.18
POLR2J3-203ENST00000464525 APOMO95445 188 aa13.92□□□□□ -0.18
POLR2J3-203ENST00000464525 FHL2Q14192 279 aa13.92□□□□□ -0.18
POLR2J3-203ENST00000464525 TRAV26-1A0A087WT03 109 aa13.92□□□□□ -0.18
POLR2J3-203ENST00000464525 GEMIN7Q9H840 131 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-203ENST00000464525 OXLD1Q5BKU9 147 aa13.91□□□□□ -0.18
POLR2J3-203ENST00000464525 OCIAD2Q56VL3 154 aa13.91□□□□□ -0.18
POLR2J3-203ENST00000464525 SFTA2Q6UW10 78 aa13.91□□□□□ -0.18
POLR2J3-203ENST00000464525 SBSPONQ8IVN8 264 aa13.91□□□□□ -0.18
POLR2J3-203ENST00000464525 SPANXB1Q9NS25 103 aaPredicted RBP13.91□□□□□ -0.18
POLR2J3-203ENST00000464525 IGHV1-58A0A0C4DH39 117 aa13.9□□□□□ -0.18
POLR2J3-203ENST00000464525 X6R8D5 127 aa13.9□□□□□ -0.18
POLR2J3-203ENST00000464525 TRBV6-4A0A1B0GX49 114 aa13.9□□□□□ -0.18
POLR2J3-203ENST00000464525 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
POLR2J3-203ENST00000464525 A0A0J9YXY3 114 aa13.89□□□□□ -0.19
POLR2J3-203ENST00000464525 VSIG2Q96IQ7 327 aa13.89□□□□□ -0.19
POLR2J3-203ENST00000464525 PKD1L1Q8TDX9 2849 aa13.89□□□□□ -0.19
POLR2J3-203ENST00000464525 DEFB4AO15263 64 aa13.88□□□□□ -0.19
POLR2J3-203ENST00000464525 LINC00242Q5T6M2 205 aa13.88□□□□□ -0.19
POLR2J3-203ENST00000464525 CFC1BP0CG36 223 aa13.87□□□□□ -0.19
POLR2J3-203ENST00000464525 CFC1P0CG37 223 aa13.87□□□□□ -0.19
POLR2J3-203ENST00000464525 CDC42SE2Q9NRR3 84 aa13.87□□□□□ -0.19
POLR2J3-203ENST00000464525 NDUFA12Q9UI09 145 aa13.87□□□□□ -0.19
POLR2J3-203ENST00000464525 CMYA5Q8N3K9 4069 aa13.86□□□□□ -0.19
POLR2J3-203ENST00000464525 DEFB135Q30KP9 77 aa13.86□□□□□ -0.19
POLR2J3-203ENST00000464525 MUSTN1Q8IVN3 82 aa13.86□□□□□ -0.19
POLR2J3-203ENST00000464525 TMEM243Q9BU79 118 aa13.86□□□□□ -0.19
POLR2J3-203ENST00000464525 H3BMG7 143 aa13.85□□□□□ -0.19
POLR2J3-203ENST00000464525 UBE2L6O14933 153 aa13.85□□□□□ -0.19
POLR2J3-203ENST00000464525 ADAMTSL4-AS1Q5T5F5 129 aa13.85□□□□□ -0.19
POLR2J3-203ENST00000464525 TMEM101Q96IK0 257 aa13.85□□□□□ -0.19
POLR2J3-203ENST00000464525 GTSF1LQ9H1H1 148 aa13.85□□□□□ -0.19
POLR2J3-203ENST00000464525 TSPAN13O95857 204 aa13.84□□□□□ -0.19
POLR2J3-203ENST00000464525 TIRAPP58753 221 aa13.84□□□□□ -0.19
POLR2J3-203ENST00000464525 LITAFQ99732 161 aa13.84□□□□□ -0.19
POLR2J3-203ENST00000464525 CSDC2Q9Y534 153 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-203ENST00000464525 EIF4EBP3O60516 100 aaPredicted RBP13.84□□□□□ -0.19
POLR2J3-203ENST00000464525 SCGB1A1P11684 91 aa13.84□□□□□ -0.19
POLR2J3-203ENST00000464525 GAGE6Q13070 117 aa13.84□□□□□ -0.19
POLR2J3-203ENST00000464525 IGLV5-45A0A087WSX0 123 aa13.83□□□□□ -0.2
POLR2J3-203ENST00000464525 WIPF1O43516 503 aa13.83□□□□□ -0.2
POLR2J3-203ENST00000464525 MTURNQ8N3F0 131 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms