RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 LINC01561Q8N1V8 128 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 C11orf44Q8N8P7 122 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 PCNX1Q96RV3 2341 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 NCOR1O75376 2440 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 IGHV3OR16-12A0A075B7B8 117 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 F8WDY8 70 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 INSP01308 110 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 RNASE1P07998 156 aaKnown RBP2.81□□□□□ -1.96
CCNL1-204ENST00000464316 HAMPP81172 84 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 ENHOQ6UWT2 76 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 FAM218AQ96MZ4 157 aa2.81□□□□□ -1.96
CCNL1-204ENST00000464316 H3BUX3 64 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 J3QLI3 93 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 K7ENP7 123 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 DEFB131AP59861 70 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 BLCAPP62952 87 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 SOSTDC1Q6X4U4 206 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 OBSCN-AS1Q96MR7 158 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 CREBBPQ92793 2442 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 MKI67P46013 3256 aaKnown RBP2.8□□□□□ -1.96
CCNL1-204ENST00000464316 FHL2Q14192 279 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 FAM19A3Q7Z5A8 133 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 DYNLRB2Q8TF09 96 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 PKIGQ9Y2B9 76 aa2.8□□□□□ -1.96
CCNL1-204ENST00000464316 LAMA2P24043 3122 aaKnown RBP2.79□□□□□ -1.96
CCNL1-204ENST00000464316 A0A087WYN8 130 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 PROK1P58294 105 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 COX6A2Q02221 97 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 C1orf195Q5TG92 126 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 Q5XG85 94 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 PRUNE2Q8WUY3 3088 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 TRGV1A0A0A0MS02 117 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 IGLV1-40P01703 118 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 LINC00337Q8N6G1 96 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 CDC42SE2Q9NRR3 84 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 IGKV3OR2-268A0A0C4DH90 116 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 CCL18P55774 89 aa2.79□□□□□ -1.96
CCNL1-204ENST00000464316 MED13LQ71F56 2210 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 ANKHD1Q8IWZ3 2542 aaKnown RBP2.78□□□□□ -1.96
CCNL1-204ENST00000464316 TRBV6-4A0A1B0GX49 114 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 A6NDX4 124 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 K7EQD1 137 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 NBL1P41271 181 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 KLKP1Q107X0 134 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 C11orf71Q6IPW1 123 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 BRD3OSQ6XYD6 125 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 BPESC1Q9GZL8 116 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 MUC4Q99102 2169 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 A0A1W2PRX2 142 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 SLPIP03973 132 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 RPL35AP18077 110 aaKnown RBP2.78□□□□□ -1.96
CCNL1-204ENST00000464316 LMO4P61968 165 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 SS18Q15532 418 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 DNAH14Q0VDD8 3507 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 SPTA1P02549 2419 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 LINC00336Q6ZUF6 198 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 FAM19A1Q7Z5A9 133 aa2.78□□□□□ -1.96
CCNL1-204ENST00000464316 TRGV2A0A075B6R0 118 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 F8WEM9 126 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 HILS1P60008 231 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 Q8N814 137 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 WFDC11Q8NEX6 87 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 FAM104AQ969W3 186 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 APC2O95996 2303 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 COL6A6A6NMZ7 2263 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 AKAP6Q13023 2319 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 DOPEY2Q9Y3R5 2298 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 H7BZZ5 65 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 ZNF561-AS1K7EIQ3 104 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 MIFP14174 115 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 CMC4P56277 68 aaPredicted RBP2.77□□□□□ -1.97
CCNL1-204ENST00000464316 SEC61GP60059 68 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 CXCL6P80162 114 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 STHQ8IWL8 128 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 GVINP1Q7Z2Y8 2422 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 LAMA3Q16787 3333 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 TRBV7-6A0A0J9YX20 115 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 LYPD5Q6UWN5 251 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.77□□□□□ -1.97
CCNL1-204ENST00000464316 Q8NA96 180 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 CYSTM1Q9H1C7 97 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 C22orf24Q9Y442 160 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 ACACAQ13085 2346 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 XIRP2A4UGR9 3374 aa2.77□□□□□ -1.97
CCNL1-204ENST00000464316 IGKV2-28A0A075B6P5 120 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 TRGV4A0A0C4DH28 118 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 IGKV2D-28P01615 120 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 WFDC9Q8NEX5 89 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 DNAH6Q9C0G6 4158 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 KHDC1LQ5JSQ8 128 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 Q6ZSN1 163 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 UBE2E2Q96LR5 201 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 TRIOBPQ9H2D6 2365 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 A0A087WZ39 114 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 OXTP01178 125 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 GRNP28799 593 aaKnown RBP2.76□□□□□ -1.97
CCNL1-204ENST00000464316 NTM-AS1Q6ZSK4 140 aa2.76□□□□□ -1.97
CCNL1-204ENST00000464316 DEFB123Q8N688 67 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms