RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 DEFB119Q8N690 84 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 TMEM190Q8WZ59 177 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 VSIG2Q96IQ7 327 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 LITAFQ99732 161 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 PRRC2AP48634 2157 aaKnown RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 DOPEY1Q5JWR5 2465 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 ZFHX3Q15911 3703 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 ANKRD11Q6UB99 2663 aaPredicted RBP2.63□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV3-66A0A0C4DH42 116 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV7-4-1A0A0J9YVY3 117 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 TRBV27A0A0K0K1C4 114 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 SDHAF1A6NFY7 115 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 PSPHP1O15172 72 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 IGKV1-17P01599 117 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV3-23P01764 117 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 C22orf24Q9Y442 160 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 PHLDA3Q9Y5J5 127 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 LOC400499M0QZD8 3231 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 FLNBO75369 2602 aaKnown RBP2.63□□□□□ -1.99
COL8A1-205ENST00000463753 ZFYVE26Q68DK2 2539 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 CSMD1Q96PZ7 3565 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 CHD7Q9P2D1 2997 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 ARHGAP32A7KAX9 2087 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 DSCR9P59020 149 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 BLCAPP62952 87 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 CLEC19AQ6UXS0 136 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 Q6ZRU5 148 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 TMEM167AQ8TBQ9 72 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 TMEM141Q96I45 108 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 UBE2E2Q96LR5 201 aa2.63□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV1OR15-1A0A075B7D0 117 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV3OR16-13A0A075B7E8 117 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV3-74A0A0B4J1X5 117 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 SOCS3O14543 225 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 CFHR3Q02985 330 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 ASXL3Q9C0F0 2248 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 SPRR3Q9UBC9 169 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 URB1O60287 2271 aaKnown RBP2.62□□□□□ -1.99
COL8A1-205ENST00000463753 DNAH1Q9P2D7 4330 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 A0A087WWL8 130 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 SPTY2D1-AS1A0A0U1RR47 76 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 PRB2P02812 416 aaPredicted RBP2.62□□□□□ -1.99
COL8A1-205ENST00000463753 SLPIP03973 132 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 B3GALT5-AS1P59052 145 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 PIK3CD-AS1Q5SR53 167 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 FAM74A4Q5TZK3 123 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 C9orf47Q6ZRZ4 202 aa2.62□□□□□ -1.99
COL8A1-205ENST00000463753 TEP1Q99973 2627 aaKnown RBP2.62□□□□□ -1.99
COL8A1-205ENST00000463753 TRAV7A0A075B6U4 112 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 TRAV10A0A0B4J240 114 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV1-69DA0A0B4J2H0 117 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 PDE6HQ13956 83 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 BEAN1Q3B7T3 259 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 FDCSPQ8NFU4 85 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 CCL13Q99616 98 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 KRTAP3-1Q9BYR8 98 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 A0A087WYN8 130 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 TRAV13-2A0A0B4J235 113 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 A0A0J9YX75 114 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV5-10-1A0A0J9YXX1 117 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 CCL3L1P16619 93 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 KLKP1Q107X0 134 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 ESRGQ1W209 222 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 C19orf54Q5BKX5 351 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 FAM222AQ5U5X8 452 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 DGAT2L7PQ6IED9 249 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 SPTSSBQ8NFR3 76 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 TIMM17AQ99595 171 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 F5P12259 2224 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 KALRNO60229 2985 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 AHCTF1Q8WYP5 2266 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV3-49A0A0A0MS15 119 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 A8MU10 97 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 IGLV2-23P01705 113 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 MIFP14174 115 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 RNASE4P34096 147 aaKnown RBP2.61□□□□□ -1.99
COL8A1-205ENST00000463753 C15orf32Q32M92 178 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 C1orf158Q8N1D5 194 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 SDK1Q7Z5N4 2213 aa2.61□□□□□ -1.99
COL8A1-205ENST00000463753 IGF2RP11717 2491 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 I3L2K1 104 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 VCYO14598 125 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 IGF1P05019 195 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 CD28P10747 220 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 HAMPP81172 84 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 KRTAP1-1Q07627 177 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 UNQ9165/PRO28630Q6UXU0 137 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 ZNF833PQ6ZTB9 187 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 COX8CQ7Z4L0 72 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 GPHB5Q86YW7 130 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 SMG1Q96Q15 3661 aaKnown RBP2.6□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV1-58A0A0C4DH39 117 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 LECT2O14960 151 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 PVRIGQ6DKI7 326 aa2.6□□□□□ -1.99
COL8A1-205ENST00000463753 MIR7-3HGQ8N6C7 128 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms