RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 SMIM2Q9BVW6 85 aa9.08□□□□□ -0.96
SEMA3D-203ENST00000463315 DNAH11Q96DT5 4516 aa9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 IGKV2-29A2NJV5 120 aaPredicted RBP9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 SNAPINO95295 136 aa9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 NPYP01303 97 aa9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 DEFB104AQ8WTQ1 72 aa9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 GNB1LQ9BYB4 327 aa9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 RPS10P5Q9NQ39 176 aa9.07□□□□□ -0.96
SEMA3D-203ENST00000463315 HLA-DQA1P01909 254 aa9.06□□□□□ -0.96
SEMA3D-203ENST00000463315 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
SEMA3D-203ENST00000463315 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
SEMA3D-203ENST00000463315 TMEM238LA0A1B0GVL6 79 aa9.05□□□□□ -0.96
SEMA3D-203ENST00000463315 K7EMI3 77 aa9.05□□□□□ -0.96
SEMA3D-203ENST00000463315 EIF4EBP3O60516 100 aaPredicted RBP9.05□□□□□ -0.96
SEMA3D-203ENST00000463315 CDK2AP2O75956 126 aa9.05□□□□□ -0.96
SEMA3D-203ENST00000463315 APOC3P02656 99 aa9.05□□□□□ -0.96
SEMA3D-203ENST00000463315 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
SEMA3D-203ENST00000463315 OR5A1Q8NGJ0 315 aa9.05□□□□□ -0.96
SEMA3D-203ENST00000463315 CCL25O15444 150 aa9.04□□□□□ -0.96
SEMA3D-203ENST00000463315 MT-ND6P03923 174 aa9.04□□□□□ -0.96
SEMA3D-203ENST00000463315 RAB5AP20339 215 aa9.04□□□□□ -0.96
SEMA3D-203ENST00000463315 BAALCQ8WXS3 180 aa9.04□□□□□ -0.96
SEMA3D-203ENST00000463315 MAP1LC3AQ9H492 121 aa9.04□□□□□ -0.96
SEMA3D-203ENST00000463315 DGAT2L7PQ6IED9 249 aa9.03□□□□□ -0.96
SEMA3D-203ENST00000463315 CLPSL2Q6UWE3 100 aa9.03□□□□□ -0.96
SEMA3D-203ENST00000463315 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
SEMA3D-203ENST00000463315 CDC42SE2Q9NRR3 84 aa9.03□□□□□ -0.96
SEMA3D-203ENST00000463315 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
SEMA3D-203ENST00000463315 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
SEMA3D-203ENST00000463315 WFDC2Q14508 124 aa9.02□□□□□ -0.97
SEMA3D-203ENST00000463315 KRTAP9-2Q9BYQ4 174 aa9.02□□□□□ -0.97
SEMA3D-203ENST00000463315 NXT2Q9NPJ8 142 aaKnown RBP9.02□□□□□ -0.97
SEMA3D-203ENST00000463315 GCSHP23434 173 aa9.01□□□□□ -0.97
SEMA3D-203ENST00000463315 Q8N8P6 123 aa9.01□□□□□ -0.97
SEMA3D-203ENST00000463315 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
SEMA3D-203ENST00000463315 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
SEMA3D-203ENST00000463315 KRTAP9-1A8MXZ3 250 aaPredicted RBP9□□□□□ -0.97
SEMA3D-203ENST00000463315 LECT2O14960 151 aa9□□□□□ -0.97
SEMA3D-203ENST00000463315 G0S2P27469 103 aa9□□□□□ -0.97
SEMA3D-203ENST00000463315 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
SEMA3D-203ENST00000463315 LINC00959A0A1B0GUT2 108 aa8.99□□□□□ -0.97
SEMA3D-203ENST00000463315 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
SEMA3D-203ENST00000463315 MRPS36P82909 103 aaKnown RBP8.99□□□□□ -0.97
SEMA3D-203ENST00000463315 SS18Q15532 418 aa8.99□□□□□ -0.97
SEMA3D-203ENST00000463315 ORMDL2Q53FV1 153 aa8.99□□□□□ -0.97
SEMA3D-203ENST00000463315 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
SEMA3D-203ENST00000463315 C1orf196B1AJZ1 125 aa8.98□□□□□ -0.97
SEMA3D-203ENST00000463315 NPSP0C0P6 89 aa8.98□□□□□ -0.97
SEMA3D-203ENST00000463315 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
SEMA3D-203ENST00000463315 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
SEMA3D-203ENST00000463315 KRTAP9-6A0A140TA67 174 aa8.97□□□□□ -0.97
SEMA3D-203ENST00000463315 LOC389332A0A1B0GUA5 103 aa8.97□□□□□ -0.97
SEMA3D-203ENST00000463315 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
SEMA3D-203ENST00000463315 ALKBH7Q9BT30 221 aaPredicted RBP8.97□□□□□ -0.97
SEMA3D-203ENST00000463315 IGKV3OR2-268A0A0C4DH90 116 aa8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 GAGE12HA6NDE8 117 aa8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 RPL39P62891 51 aaKnown RBP8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 KIAA1644Q3SXP7 199 aa8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 CD164L2Q6UWJ8 174 aa8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 KIAA1109Q2LD37 5005 aa8.96□□□□□ -0.98
SEMA3D-203ENST00000463315 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 TGIF2-C20orf24A0A0A6YYL0 155 aa8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 LINC01546A6NGU7 62 aa8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 PRSS1P07477 247 aa8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 FABP9Q0Z7S8 132 aa8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 FOXI1Q12951 378 aa8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 LRP1BQ9NZR2 4599 aa8.95□□□□□ -0.98
SEMA3D-203ENST00000463315 FUSP35637 526 aaKnown RBP eCLIP8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 Q6ZUT4 128 aa8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 SLC7A5P1Q8MH63 180 aa8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 FAM104AQ969W3 186 aa8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 SMCO4Q9NRQ5 59 aa8.94□□□□□ -0.98
SEMA3D-203ENST00000463315 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
SEMA3D-203ENST00000463315 XCL1P47992 114 aa8.93□□□□□ -0.98
SEMA3D-203ENST00000463315 C2orf66Q6UXQ4 117 aa8.93□□□□□ -0.98
SEMA3D-203ENST00000463315 AP5S1Q9NUS5 200 aa8.93□□□□□ -0.98
SEMA3D-203ENST00000463315 TRAPPC1Q9Y5R8 145 aa8.93□□□□□ -0.98
SEMA3D-203ENST00000463315 hDV102S1A0JD36 115 aa8.92□□□□□ -0.98
SEMA3D-203ENST00000463315 PAPPA-AS1Q5QFB9 102 aa8.92□□□□□ -0.98
SEMA3D-203ENST00000463315 Q6ZSA8 131 aa8.92□□□□□ -0.98
SEMA3D-203ENST00000463315 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
SEMA3D-203ENST00000463315 C9orf163Q8N9P6 203 aa8.92□□□□□ -0.98
SEMA3D-203ENST00000463315 TMEM141Q96I45 108 aa8.92□□□□□ -0.98
SEMA3D-203ENST00000463315 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
SEMA3D-203ENST00000463315 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
SEMA3D-203ENST00000463315 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
SEMA3D-203ENST00000463315 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
SEMA3D-203ENST00000463315 IGHV1-58A0A0C4DH39 117 aa8.91□□□□□ -0.98
SEMA3D-203ENST00000463315 HERC2O95714 4834 aa8.9□□□□□ -0.98
SEMA3D-203ENST00000463315 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
SEMA3D-203ENST00000463315 XGP55808 180 aa8.9□□□□□ -0.98
SEMA3D-203ENST00000463315 Q6ZN92 141 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms