RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 SLC48A1Q6P1K1 146 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 BRK1Q8WUW1 75 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 RETNLBQ9BQ08 111 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 MPC1Q9Y5U8 109 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 COL4A1P02462 1669 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 ATG2AQ2TAZ0 1938 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 PLXNA2O75051 1894 aa1.69□□□□□ -2.14
USH2A-203ENST00000463147 PLXNB2O15031 1838 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 HEATR5BQ9P2D3 2071 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 BAHCC1Q9P281 2608 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 LOC107984640A0A0U1RRK4 108 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 SMIM27A0A1W2PRY6 76 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 TCRBV4S1A1TA0A5B7 111 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 PPYP01298 95 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 TRACP01848 142 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 RBP4P02753 201 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 IAPPP10997 89 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 HLA-DRB4P13762 266 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 MIFP14174 115 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 CFAP126Q5VTH2 177 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 FP248Q71RG6 208 aaPredicted RBP1.68□□□□□ -2.14
USH2A-203ENST00000463147 COA5Q86WW8 74 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 C15orf53Q8NAA6 179 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 LINC00467Q9BRT7 94 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 TIMM8BQ9Y5J9 83 aaPredicted RBP1.68□□□□□ -2.14
USH2A-203ENST00000463147 CHCHD2Q9Y6H1 151 aaPredicted RBP1.68□□□□□ -2.14
USH2A-203ENST00000463147 HLA-DRB4X5D2U9 266 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 PLXNA4Q9HCM2 1894 aa1.68□□□□□ -2.14
USH2A-203ENST00000463147 TRAV2A0A0B4J234 112 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 TRAV13-1A0A0B4J241 112 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 LOC107984156A0A0G2JMH3 177 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 H3BVH4 76 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 M0R2P5 195 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 DPM2O94777 84 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 IFI6P09912 130 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 BAALC-AS2P0C853 105 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 GCHFRP30047 84 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 FCER1GP30273 86 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 RPS27P42677 84 aaKnown RBP1.67□□□□□ -2.14
USH2A-203ENST00000463147 SPINT3P49223 89 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 FXYD3Q14802 87 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 SPRNQ5BIV9 151 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 TMEM14EPQ6UXP3 125 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 ARL17AQ8IVW1 177 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 OR5AS1Q8N127 324 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 LINC00311Q8N616 119 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 LINC00526Q96FQ7 95 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 C14orf132Q9NPU4 83 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 TMEM167BQ9NRX6 74 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 CACNA1GO43497 2377 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 PTPRDP23468 1912 aa1.67□□□□□ -2.14
USH2A-203ENST00000463147 CEP192Q8TEP8 1941 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 IGHV1-58A0A0C4DH39 117 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 MYMXA0A1B0GTQ4 84 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 OOSP1A8MZH6 123 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 ACYP1P07311 99 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 ARL14EPLP0DKL9 152 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 COX7CP15954 63 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 FOXA3P55318 350 aaPredicted RBP1.66□□□□□ -2.14
USH2A-203ENST00000463147 DSCR4P56555 118 aaPredicted RBP1.66□□□□□ -2.14
USH2A-203ENST00000463147 EDDM3BP56851 147 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 UBE2L3P68036 154 aaKnown RBP1.66□□□□□ -2.14
USH2A-203ENST00000463147 TFF3Q07654 80 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 ZNF818PQ6ZRF7 136 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 SBSPONQ8IVN8 264 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 TMEM254Q8TBM7 123 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 IFI27L1Q96BM0 104 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 MGST2Q99735 147 aa1.66□□□□□ -2.14
USH2A-203ENST00000463147 PAPPA2Q9BXP8 1791 aa1.65□□□□□ -2.14
USH2A-203ENST00000463147 TRBV25-1A0A075B6N4 114 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 TRBV7-7A0A0K0K1E9 115 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 FAM236AA0A1B0GUQ0 79 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 FAM236BA0A1B0GV22 79 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 RBAKDNA6NC62 111 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 HIGD1CA8MV81 97 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 ATOX1O00244 68 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 NCR2O95944 276 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 IGLV1-51P01701 117 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 IGKCP01834 107 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 HBDP02042 147 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 HMGA1P17096 107 aaKnown RBP1.65□□□□□ -2.15
USH2A-203ENST00000463147 ROMO1P60602 79 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 PLGLB1Q02325 96 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 ATXN8Q156A1 80 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 ZNF56Q15929 161 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 TMEM170BQ5T4T1 132 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 GDF5OSQ5U4N7 250 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 RPS19BP1Q86WX3 136 aaKnown RBP1.65□□□□□ -2.15
USH2A-203ENST00000463147 FAM216BQ8N7L0 139 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 COPS9Q8WXC6 57 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 DPH3Q96FX2 82 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 AGPAT4-IT1Q9H0P7 198 aa1.65□□□□□ -2.15
USH2A-203ENST00000463147 DOCK10Q96BY6 2186 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 TRBV7-3A0A075B6L6 115 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 CXorf51AA0A1B0GTR3 108 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 LINC01549A6NIU2 74 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 RNASE3P12724 160 aaKnown RBP1.64□□□□□ -2.15
USH2A-203ENST00000463147 CRYGSP22914 178 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 ZNF137PP52743 207 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms