RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
SND1-203ENST00000463020 SLC25A29Q8N8R3 303 aa10.33□□□□□ -0.76
SND1-203ENST00000463020 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
SND1-203ENST00000463020 LOC389332A0A1B0GUA5 103 aa10.32□□□□□ -0.76
SND1-203ENST00000463020 M0R143 59 aa10.32□□□□□ -0.76
SND1-203ENST00000463020 S100A4P26447 101 aaKnown RBP10.32□□□□□ -0.76
SND1-203ENST00000463020 IFI27P40305 119 aaPredicted RBP10.32□□□□□ -0.76
SND1-203ENST00000463020 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
SND1-203ENST00000463020 UQCR10Q9UDW1 63 aa10.32□□□□□ -0.76
SND1-203ENST00000463020 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
SND1-203ENST00000463020 HSBP1L1C9JCN9 74 aa10.31□□□□□ -0.76
SND1-203ENST00000463020 M0R2P5 195 aa10.31□□□□□ -0.76
SND1-203ENST00000463020 TDRG1Q3Y452 100 aa10.31□□□□□ -0.76
SND1-203ENST00000463020 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
SND1-203ENST00000463020 FAM159AQ6UWV7 190 aa10.31□□□□□ -0.76
SND1-203ENST00000463020 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
SND1-203ENST00000463020 NXT2Q9NPJ8 142 aaKnown RBP10.31□□□□□ -0.76
SND1-203ENST00000463020 H3BVH4 76 aa10.3□□□□□ -0.76
SND1-203ENST00000463020 NPYP01303 97 aa10.3□□□□□ -0.76
SND1-203ENST00000463020 C2orf88Q9BSF0 95 aa10.3□□□□□ -0.76
SND1-203ENST00000463020 TRAV8-6A0A0B4J262 113 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 SMKR1H3BMG3 65 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 TNFRSF6BO95407 300 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 NCR2O95944 276 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 HBDP02042 147 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 LELP1Q5T871 98 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 CFAP126Q5VTH2 177 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 MRAP2Q96G30 205 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 PLA2G2DQ9UNK4 145 aa10.29□□□□□ -0.76
SND1-203ENST00000463020 RNF213Q63HN8 5207 aa10.28□□□□□ -0.76
SND1-203ENST00000463020 HNRNPA3P51991 378 aaKnown RBP10.28□□□□□ -0.76
SND1-203ENST00000463020 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
SND1-203ENST00000463020 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
SND1-203ENST00000463020 ATOH7Q8N100 152 aa10.28□□□□□ -0.76
SND1-203ENST00000463020 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
SND1-203ENST00000463020 Q9UF83 564 aa10.28□□□□□ -0.76
SND1-203ENST00000463020 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
SND1-203ENST00000463020 IGLC3P0DOY3 106 aa10.27□□□□□ -0.77
SND1-203ENST00000463020 LINC00173Q6ZV60 143 aa10.27□□□□□ -0.77
SND1-203ENST00000463020 Q8N8P6 123 aa10.27□□□□□ -0.77
SND1-203ENST00000463020 SYT8Q8NBV8 401 aa10.27□□□□□ -0.77
SND1-203ENST00000463020 ST20Q9HBF5 79 aa10.27□□□□□ -0.77
SND1-203ENST00000463020 LINC01546A6NGU7 62 aa10.26□□□□□ -0.77
SND1-203ENST00000463020 RS1O15537 224 aa10.26□□□□□ -0.77
SND1-203ENST00000463020 LAGE3Q14657 143 aa10.26□□□□□ -0.77
SND1-203ENST00000463020 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
SND1-203ENST00000463020 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
SND1-203ENST00000463020 LRP2P98164 4655 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 TNXBP22105 4242 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 LINC00694P0DN24 101 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 FCER1GP30273 86 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 Q6ZN92 141 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 GTSF1LQ9H1H1 148 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 DPH3P1Q9H4G8 78 aa10.25□□□□□ -0.77
SND1-203ENST00000463020 PRSS47A8MTI9 375 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 H0Y8G0 127 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 M0R381 172 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 PPP1R17O96001 155 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 OXTP01178 125 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 RHOHQ15669 191 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 ATP6V0E2Q8NHE4 81 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 AP1S3Q96PC3 154 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
SND1-203ENST00000463020 TRBV6-4A0A1B0GX49 114 aa10.23□□□□□ -0.77
SND1-203ENST00000463020 IFI27L1Q96BM0 104 aa10.23□□□□□ -0.77
SND1-203ENST00000463020 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
SND1-203ENST00000463020 TM2D2Q9BX73 214 aa10.23□□□□□ -0.77
SND1-203ENST00000463020 A0A096LNJ9 63 aa10.22□□□□□ -0.77
SND1-203ENST00000463020 SMIM17P0DL12 118 aa10.22□□□□□ -0.77
SND1-203ENST00000463020 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
SND1-203ENST00000463020 GAGE12JA6NER3 117 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 ATP5LO75964 103 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 GAGE1Q13065 139 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 GAGE4Q13068 117 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 GAGE5Q13069 117 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 MAJINQ3KP22 176 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 GAGE13Q4V321 117 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 NRACQ8N912 160 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 PMCHL2Q9BQD1 86 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 C20orf78Q9BR46 151 aa10.21□□□□□ -0.77
SND1-203ENST00000463020 A0A1B0GV90 55 aa10.2□□□□□ -0.78
SND1-203ENST00000463020 hDV102S1A0JD36 115 aa10.2□□□□□ -0.78
SND1-203ENST00000463020 K7EMI3 77 aa10.2□□□□□ -0.78
SND1-203ENST00000463020 MGPP08493 103 aa10.2□□□□□ -0.78
SND1-203ENST00000463020 RNASE3P12724 160 aaKnown RBP10.2□□□□□ -0.78
SND1-203ENST00000463020 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
SND1-203ENST00000463020 MT1HL1P0DM35 61 aa10.19□□□□□ -0.78
SND1-203ENST00000463020 SLC25A34Q6PIV7 304 aa10.19□□□□□ -0.78
SND1-203ENST00000463020 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
SND1-203ENST00000463020 JPT2Q9H910 190 aa10.19□□□□□ -0.78
SND1-203ENST00000463020 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
SND1-203ENST00000463020 ORMDL2Q53FV1 153 aa10.18□□□□□ -0.78
SND1-203ENST00000463020 COL5A1-AS1Q5SY13 56 aa10.18□□□□□ -0.78
SND1-203ENST00000463020 SMIM2Q9BVW6 85 aa10.18□□□□□ -0.78
SND1-203ENST00000463020 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
SND1-203ENST00000463020 G0S2P27469 103 aa10.17□□□□□ -0.78
SND1-203ENST00000463020 BATFQ16520 125 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms