RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 DEFB114Q30KQ6 69 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 ODF3L2Q3SX64 289 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 SOSTDC1Q6X4U4 206 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 C18orf65Q6ZTR6 163 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 ZGRF1Q86YA3 2104 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 TMEM86BQ8N661 226 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.52□□□□□ -2.01
COL8A1-204ENST00000462604 COX7B2Q8TF08 81 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 CDC42SE2Q9NRR3 84 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 Q9UF83 564 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 ZZEF1O43149 2961 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 MAP1BP46821 2468 aaKnown RBP2.51□□□□□ -2.01
COL8A1-204ENST00000462604 TTC28Q96AY4 2481 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 AKAP13Q12802 2813 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 APC2O95996 2303 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 TRGV2A0A075B6R0 118 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 H0YGX0 51 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 LINC00694P0DN24 101 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 CXCL5P42830 114 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 RPL28P46779 137 aaKnown RBP2.51□□□□□ -2.01
COL8A1-204ENST00000462604 LINC00158P58513 81 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 C9orf153Q5TBE3 101 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 HIST2H2BCQ6DN03 193 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 HIST2H2BDQ6DRA6 164 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 GAGE2AQ6NT46 116 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 SDIM1Q6ZPB5 146 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 C1orf158Q8N1D5 194 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 NRGNQ92686 78 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 C16orf74Q96GX8 76 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 FAM110AQ9BQ89 295 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 CHCHD5Q9BSY4 110 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 SND1-IT1Q9HBX3 110 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 BOD1L1Q8NFC6 3051 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 LAMA5O15230 3695 aa2.51□□□□□ -2.01
COL8A1-204ENST00000462604 ADGRG4Q8IZF6 3080 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 ZNF292O60281 2723 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 KALRNO60229 2985 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 GVINP1Q7Z2Y8 2422 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 TRGV4A0A0C4DH28 118 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 TRBV6-4A0A1B0GX49 114 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 IBA57-AS1B1ANH7 110 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 ATOX1O00244 68 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 UQCRQO14949 82 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 WIPF1O43516 503 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 NDUFA7O95182 113 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 NTM-AS1Q6ZSK4 140 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 Q6ZTI0 123 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 SMIM20Q8N5G0 67 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 C3orf22Q8N5N4 141 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 MIR7-3HGQ8N6C7 128 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 MAPK1IP1LQ8NDC0 245 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 FAM218AQ96MZ4 157 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 NOP10Q9NPE3 64 aaKnown RBP2.5□□□□□ -2.01
COL8A1-204ENST00000462604 TOMM7Q9P0U1 55 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 ABCA1O95477 2261 aa2.5□□□□□ -2.01
COL8A1-204ENST00000462604 TLN1Q9Y490 2541 aaKnown RBP2.49□□□□□ -2.01
COL8A1-204ENST00000462604 POLEQ07864 2286 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 CEP250Q9BV73 2442 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 CEP295Q9C0D2 2601 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 PIEZO2Q9H5I5 2752 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 A0A087WYN8 130 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 IGKV3OR2-268A0A0C4DH90 116 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 USP17L23D6RBM5 183 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 CCL24O00175 119 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 PAX4O43316 350 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 CCL18P55774 89 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 DEFB113Q30KQ7 82 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 Q6JHZ5 121 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 C5orf38Q86SI9 138 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 LRRC75A-AS1Q8N1F1 130 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 LINC00337Q8N6G1 96 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 C11orf44Q8N8P7 122 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 OR13C6PQ8NH95 151 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 SMIM11BQ8TCY0 68 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 KRTAP3-3Q9BYR6 98 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 KRTAP3-2Q9BYR7 98 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 Q9HAA7 133 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 CUL9Q8IWT3 2517 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 MGAQ8IWI9 3026 aa2.49□□□□□ -2.01
COL8A1-204ENST00000462604 SPTA1P02549 2419 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 CNOT1A5YKK6 2376 aaKnown RBP2.48□□□□□ -2.01
COL8A1-204ENST00000462604 TPRP12270 2363 aaKnown RBP2.48□□□□□ -2.01
COL8A1-204ENST00000462604 IGKV2-28A0A075B6P5 120 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 A0A087WZ39 114 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 TRBV6-8A0A0A6YYG3 113 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 LOC100131303A0A0U1RQF7 123 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 A0A1B0GX51 115 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 DNAJC9-AS1A6NH13 148 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 LECT2O14960 151 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 IGKV2D-28P01615 120 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 COX7CP15954 63 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 RPL35AP18077 110 aaKnown RBP2.48□□□□□ -2.01
COL8A1-204ENST00000462604 RPL18AQ02543 176 aaKnown RBP2.48□□□□□ -2.01
COL8A1-204ENST00000462604 SS18Q15532 418 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 C6orf226Q5I0X4 101 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 S100A7L2Q5SY68 101 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 ATP5EP2Q5VTU8 51 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 LINC01561Q8N1V8 128 aa2.48□□□□□ -2.01
COL8A1-204ENST00000462604 LINC00526Q96FQ7 95 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms