RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 IGLL5B9A064 214 aa10.49□□□□□ -0.73
TMEM39A-203ENST00000461654 FGF6P10767 208 aa10.49□□□□□ -0.73
TMEM39A-203ENST00000461654 TIRAPP58753 221 aa10.49□□□□□ -0.73
TMEM39A-203ENST00000461654 JOSD1Q15040 202 aaPredicted RBP10.49□□□□□ -0.73
TMEM39A-203ENST00000461654 LELP1Q5T871 98 aa10.49□□□□□ -0.73
TMEM39A-203ENST00000461654 UBE2D4Q9Y2X8 147 aa10.49□□□□□ -0.73
TMEM39A-203ENST00000461654 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 ZNF25P17030 456 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 GAGE6Q13070 117 aa10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 LYPD5Q6UWN5 251 aa10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 SPATA12Q7Z6I5 190 aa10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 MRPL52Q86TS9 123 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 OR5A1Q8NGJ0 315 aa10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 VCX2Q9H322 139 aa10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 APLNQ9ULZ1 77 aa10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 EPPK1P58107 5090 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-203ENST00000461654 ALMS1Q8TCU4 4167 aa10.47□□□□□ -0.73
TMEM39A-203ENST00000461654 TMEM262E9PQX1 116 aa10.47□□□□□ -0.73
TMEM39A-203ENST00000461654 SMIM6P0DI80 62 aa10.47□□□□□ -0.73
TMEM39A-203ENST00000461654 BAALCQ8WXS3 180 aa10.47□□□□□ -0.73
TMEM39A-203ENST00000461654 CSDC2Q9Y534 153 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-203ENST00000461654 PMVKQ15126 192 aa10.46□□□□□ -0.73
TMEM39A-203ENST00000461654 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
TMEM39A-203ENST00000461654 TRAV12-1A0A0B4J245 112 aa10.45□□□□□ -0.74
TMEM39A-203ENST00000461654 MRPS36P82909 103 aaKnown RBP10.45□□□□□ -0.74
TMEM39A-203ENST00000461654 TEX43Q6ZNM6 134 aa10.45□□□□□ -0.74
TMEM39A-203ENST00000461654 C2orf88Q9BSF0 95 aa10.45□□□□□ -0.74
TMEM39A-203ENST00000461654 A0A087WX48 190 aa10.44□□□□□ -0.74
TMEM39A-203ENST00000461654 PYY3Q5JQD4 70 aa10.44□□□□□ -0.74
TMEM39A-203ENST00000461654 LINC01545Q5VT33 79 aa10.44□□□□□ -0.74
TMEM39A-203ENST00000461654 OPRPNQ99935 248 aaPredicted RBP10.44□□□□□ -0.74
TMEM39A-203ENST00000461654 CHTOPQ9Y3Y2 248 aaKnown RBP10.44□□□□□ -0.74
TMEM39A-203ENST00000461654 PRSS29PA6NIE9 313 aa10.43□□□□□ -0.74
TMEM39A-203ENST00000461654 CCL18P55774 89 aa10.43□□□□□ -0.74
TMEM39A-203ENST00000461654 ZNF664Q8N3J9 261 aa10.43□□□□□ -0.74
TMEM39A-203ENST00000461654 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
TMEM39A-203ENST00000461654 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
TMEM39A-203ENST00000461654 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
TMEM39A-203ENST00000461654 ODF1Q14990 250 aa10.42□□□□□ -0.74
TMEM39A-203ENST00000461654 ESRGQ1W209 222 aa10.42□□□□□ -0.74
TMEM39A-203ENST00000461654 Q6ZUT4 128 aa10.42□□□□□ -0.74
TMEM39A-203ENST00000461654 F8VRH5 84 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 DPM2O94777 84 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 PLNP26678 52 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 RBX1P62877 108 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 S100A12P80511 92 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 Q8N976 141 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 PMCHL2Q9BQD1 86 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
TMEM39A-203ENST00000461654 RNASE13Q5GAN3 156 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-203ENST00000461654 AMELXQ99217 191 aa10.4□□□□□ -0.74
TMEM39A-203ENST00000461654 MRPL35Q9NZE8 188 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-203ENST00000461654 HSBP1L1C9JCN9 74 aa10.39□□□□□ -0.75
TMEM39A-203ENST00000461654 IGKCP01834 107 aa10.39□□□□□ -0.75
TMEM39A-203ENST00000461654 MPV17L2Q567V2 206 aa10.39□□□□□ -0.75
TMEM39A-203ENST00000461654 ZC2HC1BQ5TFG8 222 aa10.39□□□□□ -0.75
TMEM39A-203ENST00000461654 C12orf57Q99622 126 aa10.38□□□□□ -0.75
TMEM39A-203ENST00000461654 MRPS16Q9Y3D3 137 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-203ENST00000461654 IGLV4-60A0A075B6I1 120 aa10.37□□□□□ -0.75
TMEM39A-203ENST00000461654 ANGP03950 147 aaKnown RBP10.37□□□□□ -0.75
TMEM39A-203ENST00000461654 SEC11AP67812 179 aa10.37□□□□□ -0.75
TMEM39A-203ENST00000461654 ATOH7Q8N100 152 aa10.37□□□□□ -0.75
TMEM39A-203ENST00000461654 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
TMEM39A-203ENST00000461654 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
TMEM39A-203ENST00000461654 WFDC10BQ8IUB3 73 aa10.36□□□□□ -0.75
TMEM39A-203ENST00000461654 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
TMEM39A-203ENST00000461654 LINC00518Q8N0U6 118 aa10.36□□□□□ -0.75
TMEM39A-203ENST00000461654 GEMIN7Q9H840 131 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-203ENST00000461654 TRAV9-2A0A087WT02 112 aa10.35□□□□□ -0.75
TMEM39A-203ENST00000461654 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
TMEM39A-203ENST00000461654 IGKV3OR2-268A0A0C4DH90 116 aa10.35□□□□□ -0.75
TMEM39A-203ENST00000461654 A0A0J9YXV3 536 aa10.35□□□□□ -0.75
TMEM39A-203ENST00000461654 CHAC1Q9BUX1 264 aa10.35□□□□□ -0.75
TMEM39A-203ENST00000461654 LINC00588Q9Y4M8 146 aa10.35□□□□□ -0.75
TMEM39A-203ENST00000461654 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
TMEM39A-203ENST00000461654 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
TMEM39A-203ENST00000461654 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
TMEM39A-203ENST00000461654 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
TMEM39A-203ENST00000461654 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
TMEM39A-203ENST00000461654 UBE2D1P51668 147 aa10.34□□□□□ -0.75
TMEM39A-203ENST00000461654 NFE4Q86UQ8 179 aa10.34□□□□□ -0.75
TMEM39A-203ENST00000461654 IGLV4-69A0A075B6H9 119 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 SIVA1O15304 175 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 CCL25O15444 150 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 CRPP02741 224 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 HERVK_113P63121 156 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 SS18Q15532 418 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 LINC00269Q8N2A0 174 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 KMT2AQ03164 3969 aa10.33□□□□□ -0.76
TMEM39A-203ENST00000461654 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 HERVK_113P61574 105 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 REG3AQ06141 175 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 LINC01556Q5JQF7 62 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 KLK12Q9UKR0 248 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 VPS13DQ5THJ4 4388 aa10.32□□□□□ -0.76
TMEM39A-203ENST00000461654 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms