RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 UBE2WQ96B02 151 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 IMMP2LQ96T52 175 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 TMEM243Q9BU79 118 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 CHCHD7Q9BUK0 85 aa4.86□□□□□ -1.63
RTN4-212ENST00000461004 TGIF2-C20orf24A0A0A6YYL0 155 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 WFDC2Q14508 124 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 RHEBQ15382 184 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 KIAA1644Q3SXP7 199 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 TMEM97Q5BJF2 176 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 KCNIP4Q6PIL6 250 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 C10orf126Q8N4M7 172 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.85□□□□□ -1.63
RTN4-212ENST00000461004 C20orf203Q8NBC4 194 aa4.85□□□□□ -1.63
RTN4-212ENST00000461004 TRBV24-1A0A075B6N3 115 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 TRBV27A0A0K0K1C4 114 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 LRCOL1A6NCL2 159 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 K7EP13 123 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 VCYO14598 125 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 ANGP03950 147 aaKnown RBP4.84□□□□□ -1.63
RTN4-212ENST00000461004 S100A8P05109 93 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 ESDP10768 282 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 LINC00269Q8N2A0 174 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 PRELID3AQ96N28 172 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 DNAH8Q96JB1 4490 aa4.84□□□□□ -1.63
RTN4-212ENST00000461004 IGKV2D-24A0A075B6R9 120 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 A0A087WTM6 91 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 LOC389332A0A1B0GUA5 103 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 LECT2O14960 151 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 TCAPO15273 167 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 APCSP02743 223 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 LAGE3Q14657 143 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 SPATA12Q7Z6I5 190 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 NFE4Q86UQ8 179 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 ORMDL3Q8N138 153 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 SVBPQ8N300 66 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 BAALCQ8WXS3 180 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 YPEL4Q96NS1 127 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 C20orf78Q9BR46 151 aa4.83□□□□□ -1.64
RTN4-212ENST00000461004 KIAA1109Q2LD37 5005 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 IGLV10-54A0A075B6I4 117 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 TRAV8-3A0A0A6YYJ7 113 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 IGKV3OR2-268A0A0C4DH90 116 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 UBE2L6O14933 153 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 SNAPINO95295 136 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 FGF6P10767 208 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 S100PP25815 95 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 ELOBQ15370 118 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 RNASEKQ6P5S7 137 aaKnown RBP4.82□□□□□ -1.64
RTN4-212ENST00000461004 SMIM2Q9BVW6 85 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 PRR34Q9NV39 138 aa4.82□□□□□ -1.64
RTN4-212ENST00000461004 APOBP04114 4563 aaKnown RBP4.82□□□□□ -1.64
RTN4-212ENST00000461004 TRAV9-1A0A075B6T8 112 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 A0A1B0GUV1 79 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 PSCAO43653 123 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 PPP1R17O96001 155 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 PPBPP02775 128 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 FCER1GP30273 86 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 RPL39P62891 51 aaKnown RBP4.81□□□□□ -1.64
RTN4-212ENST00000461004 RPL32P62910 135 aaKnown RBP4.81□□□□□ -1.64
RTN4-212ENST00000461004 REG3AQ06141 175 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 NDUFA5Q16718 116 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 RNASE13Q5GAN3 156 aaKnown RBP4.81□□□□□ -1.64
RTN4-212ENST00000461004 CBLN2Q8IUK8 224 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 FAM104AQ969W3 186 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 OPRPNQ99935 248 aaPredicted RBP4.81□□□□□ -1.64
RTN4-212ENST00000461004 GNB1LQ9BYB4 327 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 RYR1P21817 5038 aa4.81□□□□□ -1.64
RTN4-212ENST00000461004 PRSS47A8MTI9 375 aa4.8□□□□□ -1.64
RTN4-212ENST00000461004 PHOX2AO14813 284 aa4.8□□□□□ -1.64
RTN4-212ENST00000461004 CRPP02741 224 aa4.8□□□□□ -1.64
RTN4-212ENST00000461004 AMMECR1LQ6DCA0 310 aa4.8□□□□□ -1.64
RTN4-212ENST00000461004 KIR2DL4Q99706 377 aa4.8□□□□□ -1.64
RTN4-212ENST00000461004 H7C423 109 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 HLA-DQA1P01909 254 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 IFI27P40305 119 aaPredicted RBP4.79□□□□□ -1.64
RTN4-212ENST00000461004 PCP4P48539 62 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 PKIAP61925 76 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 Q0VG73 95 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 FABP9Q0Z7S8 132 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 MIAQ16674 131 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 Q6ZUT4 128 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 Q8N814 137 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 Q8N8P6 123 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 ALKBH7Q9BT30 221 aaPredicted RBP4.79□□□□□ -1.64
RTN4-212ENST00000461004 MAP1LC3AQ9H492 121 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 CDC42SE2Q9NRR3 84 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 UBE2D4Q9Y2X8 147 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 HSPG2P98160 4391 aa4.79□□□□□ -1.64
RTN4-212ENST00000461004 HERC2O95714 4834 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
RTN4-212ENST00000461004 C16orf90A8MZG2 172 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 SCO1O75880 301 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 MRPL52Q86TS9 123 aaKnown RBP4.78□□□□□ -1.64
RTN4-212ENST00000461004 ZNF664Q8N3J9 261 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 OR5A1Q8NGJ0 315 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 RMI2Q96E14 147 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 LAMTOR2Q9Y2Q5 125 aa4.78□□□□□ -1.64
RTN4-212ENST00000461004 TRAPPC1Q9Y5R8 145 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms