RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CARD19Q96LW7 228 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 DEFB131BA0A096LNP1 70 aa7.86□□□□□ -1.15
APTX-209ENST00000460940 ASIPP42127 132 aa7.86□□□□□ -1.15
APTX-209ENST00000460940 ZNF80P51504 273 aaPredicted RBP7.86□□□□□ -1.15
APTX-209ENST00000460940 HIST1H4GQ99525 98 aa7.86□□□□□ -1.15
APTX-209ENST00000460940 FABP5P3A8MUU1 101 aa7.85□□□□□ -1.15
APTX-209ENST00000460940 DEFB130BP0DP73 79 aa7.85□□□□□ -1.15
APTX-209ENST00000460940 DEFB130AP0DP74 79 aa7.85□□□□□ -1.15
APTX-209ENST00000460940 NDUFV3P56181 108 aaKnown RBP7.85□□□□□ -1.15
APTX-209ENST00000460940 ZC2HC1BQ5TFG8 222 aa7.85□□□□□ -1.15
APTX-209ENST00000460940 TTTY13Q9BZ97 58 aa7.85□□□□□ -1.15
APTX-209ENST00000460940 PPDPFQ9H3Y8 114 aa7.85□□□□□ -1.15
APTX-209ENST00000460940 MAP1LC3AQ9H492 121 aa7.85□□□□□ -1.15
APTX-209ENST00000460940 NXT2Q9NPJ8 142 aaKnown RBP7.85□□□□□ -1.15
APTX-209ENST00000460940 NPYP01303 97 aa7.84□□□□□ -1.15
APTX-209ENST00000460940 ATP5G1P05496 136 aa7.84□□□□□ -1.15
APTX-209ENST00000460940 UBE2D3P61077 147 aa7.84□□□□□ -1.15
APTX-209ENST00000460940 UBE2D2P62837 147 aa7.84□□□□□ -1.15
APTX-209ENST00000460940 AMN1Q8IY45 258 aa7.84□□□□□ -1.15
APTX-209ENST00000460940 TRBV20-1A0A075B6N2 111 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 TRGV1A0A0A0MS02 117 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 IGHV3-16A0A0C4DH30 117 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 MAPKAPK5-AS1Q8N8E1 139 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 PRSS1P07477 247 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 CKS2P33552 79 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 GAGE2BQ13066 116 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 GAGE2EQ4V326 116 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 Q6ZTI0 123 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 MDFICQ9P1T7 246 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 C11orf21Q9P2W6 132 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 GAGE2DQ9UEU5 116 aa7.83□□□□□ -1.16
APTX-209ENST00000460940 PLECQ15149 4684 aaKnown RBP7.82□□□□□ -1.16
APTX-209ENST00000460940 IGHV4-4A0A075B6R2 117 aa7.82□□□□□ -1.16
APTX-209ENST00000460940 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
APTX-209ENST00000460940 A8MWV9 139 aa7.82□□□□□ -1.16
APTX-209ENST00000460940 SH2D1AO60880 128 aa7.82□□□□□ -1.16
APTX-209ENST00000460940 HTN3P15516 51 aa7.82□□□□□ -1.16
APTX-209ENST00000460940 PLNP26678 52 aa7.82□□□□□ -1.16
APTX-209ENST00000460940 LYZL1Q6UWQ5 148 aa7.82□□□□□ -1.16
APTX-209ENST00000460940 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 TRGV2A0A075B6R0 118 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 GNRH2O43555 120 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 IFITM1P13164 125 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 CRIP1P50238 77 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 UBE2D1P51668 147 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 IGKV3D-20A0A0C4DH25 116 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 LCE6AA0A183 80 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 CCDC179H3BU77 68 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 K7EMI3 77 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 M0R2P5 195 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 ORM1P02763 201 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 PSMB2P49721 201 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 RASL10AQ92737 203 aa7.81□□□□□ -1.16
APTX-209ENST00000460940 KMT2CQ8NEZ4 4911 aaKnown RBP7.8□□□□□ -1.16
APTX-209ENST00000460940 LYSTQ99698 3801 aa7.8□□□□□ -1.16
APTX-209ENST00000460940 F5H768 121 aa7.8□□□□□ -1.16
APTX-209ENST00000460940 SNCGO76070 127 aa7.8□□□□□ -1.16
APTX-209ENST00000460940 TTC32Q5I0X7 151 aa7.8□□□□□ -1.16
APTX-209ENST00000460940 DNAJC30Q96LL9 226 aa7.8□□□□□ -1.16
APTX-209ENST00000460940 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
APTX-209ENST00000460940 APLNQ9ULZ1 77 aa7.8□□□□□ -1.16
APTX-209ENST00000460940 S100A4P26447 101 aaKnown RBP7.79□□□□□ -1.16
APTX-209ENST00000460940 C15orf53Q8NAA6 179 aa7.79□□□□□ -1.16
APTX-209ENST00000460940 TRAV12-1A0A0B4J245 112 aa7.79□□□□□ -1.16
APTX-209ENST00000460940 ANKRD29Q8N6D5 301 aa7.79□□□□□ -1.16
APTX-209ENST00000460940 Q8N8P6 123 aa7.79□□□□□ -1.16
APTX-209ENST00000460940 LINC00476Q8WZB0 136 aa7.79□□□□□ -1.16
APTX-209ENST00000460940 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
APTX-209ENST00000460940 MRPL35Q9NZE8 188 aaKnown RBP7.79□□□□□ -1.16
APTX-209ENST00000460940 RNASE3P12724 160 aaKnown RBP7.78□□□□□ -1.16
APTX-209ENST00000460940 MRPL23Q16540 153 aaKnown RBP7.78□□□□□ -1.16
APTX-209ENST00000460940 PIK3CD-AS1Q5SR53 167 aa7.78□□□□□ -1.16
APTX-209ENST00000460940 RNF185Q96GF1 192 aa7.78□□□□□ -1.16
APTX-209ENST00000460940 CNFNQ9BYD5 112 aa7.78□□□□□ -1.16
APTX-209ENST00000460940 TRAV4A0A0B4J268 109 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 LINC01549A6NIU2 74 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 SMKR1H3BMG3 65 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 IGLC6P0CF74 106 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 H3BNG1 76 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 TNFRSF6BO95407 300 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 MED14OSP0DP75 135 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 ZNF876PQ49A33 203 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 MUC4Q99102 2169 aa7.77□□□□□ -1.17
APTX-209ENST00000460940 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
APTX-209ENST00000460940 LOC107984156A0A0G2JMH3 177 aa7.76□□□□□ -1.17
APTX-209ENST00000460940 F8VRH5 84 aa7.76□□□□□ -1.17
APTX-209ENST00000460940 H3BVH4 76 aa7.76□□□□□ -1.17
APTX-209ENST00000460940 TCL1BO95988 128 aa7.76□□□□□ -1.17
APTX-209ENST00000460940 ARL17AQ8IVW1 177 aa7.76□□□□□ -1.17
APTX-209ENST00000460940 TMSB15BA0A087X1C1 80 aa7.75□□□□□ -1.17
APTX-209ENST00000460940 H7C1H1 209 aa7.75□□□□□ -1.17
APTX-209ENST00000460940 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
APTX-209ENST00000460940 P0DMU3 169 aa7.75□□□□□ -1.17
APTX-209ENST00000460940 FAM231AP0DMU4 169 aa7.75□□□□□ -1.17
APTX-209ENST00000460940 FAM231CP0DMU5 169 aa7.75□□□□□ -1.17
APTX-209ENST00000460940 ZFP2Q6ZN57 461 aa7.75□□□□□ -1.17
APTX-209ENST00000460940 LY6G6CO95867 125 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms