RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 RNASEKQ6P5S7 137 aaKnown RBP15.04■□□□□ -0
C9orf3-209ENST00000460573 MRPL52Q86TS9 123 aaKnown RBP15.04■□□□□ -0
C9orf3-209ENST00000460573 IGLV4-60A0A075B6I1 120 aa15.03■□□□□ -0
C9orf3-209ENST00000460573 MIAQ16674 131 aa15.03■□□□□ -0
C9orf3-209ENST00000460573 ENHOQ6UWT2 76 aa15.03■□□□□ -0
C9orf3-209ENST00000460573 LINC00269Q8N2A0 174 aa15.03■□□□□ -0
C9orf3-209ENST00000460573 PSCAO43653 123 aa15.02■□□□□ -0
C9orf3-209ENST00000460573 REG3AQ06141 175 aa15.01□□□□□ -0.01
C9orf3-209ENST00000460573 CSDC2Q9Y534 153 aaKnown RBP15.01□□□□□ -0.01
C9orf3-209ENST00000460573 DNAH2Q9P225 4427 aa15□□□□□ -0.01
C9orf3-209ENST00000460573 TNP2Q05952 138 aa15□□□□□ -0.01
C9orf3-209ENST00000460573 ORMDL2Q53FV1 153 aa15□□□□□ -0.01
C9orf3-209ENST00000460573 DGAT2L7PQ6IED9 249 aa15□□□□□ -0.01
C9orf3-209ENST00000460573 OR5A1Q8NGJ0 315 aa15□□□□□ -0.01
C9orf3-209ENST00000460573 TIMM21Q9BVV7 248 aa15□□□□□ -0.01
C9orf3-209ENST00000460573 C16orf90A8MZG2 172 aa14.99□□□□□ -0.01
C9orf3-209ENST00000460573 IFI27P40305 119 aaPredicted RBP14.99□□□□□ -0.01
C9orf3-209ENST00000460573 COA6Q5JTJ3 125 aaKnown RBP14.99□□□□□ -0.01
C9orf3-209ENST00000460573 PRSS3P2Q8NHM4 247 aa14.99□□□□□ -0.01
C9orf3-209ENST00000460573 C1orf43Q9BWL3 253 aa14.99□□□□□ -0.01
C9orf3-209ENST00000460573 IGKV2D-24A0A075B6R9 120 aa14.98□□□□□ -0.01
C9orf3-209ENST00000460573 TRAV8-4A0A0B4J246 113 aa14.98□□□□□ -0.01
C9orf3-209ENST00000460573 UBE2D4Q9Y2X8 147 aa14.98□□□□□ -0.01
C9orf3-209ENST00000460573 HERC2O95714 4834 aa14.97□□□□□ -0.01
C9orf3-209ENST00000460573 G0S2P27469 103 aa14.97□□□□□ -0.01
C9orf3-209ENST00000460573 NDUFA6P56556 154 aa14.97□□□□□ -0.01
C9orf3-209ENST00000460573 C5orf52A6NGY3 159 aa14.96□□□□□ -0.01
C9orf3-209ENST00000460573 EREGO14944 169 aa14.96□□□□□ -0.01
C9orf3-209ENST00000460573 CLPSL2Q6UWE3 100 aa14.96□□□□□ -0.01
C9orf3-209ENST00000460573 ZNF664Q8N3J9 261 aa14.96□□□□□ -0.01
C9orf3-209ENST00000460573 CDC42SE2Q9NRR3 84 aa14.96□□□□□ -0.01
C9orf3-209ENST00000460573 SPANXA1Q9NS26 97 aa14.96□□□□□ -0.01
C9orf3-209ENST00000460573 LINC01546A6NGU7 62 aa14.94□□□□□ -0.02
C9orf3-209ENST00000460573 RPL39P62891 51 aaKnown RBP14.94□□□□□ -0.02
C9orf3-209ENST00000460573 DNAH17Q9UFH2 4485 aa14.94□□□□□ -0.02
C9orf3-209ENST00000460573 FAT2Q9NYQ8 4349 aa14.93□□□□□ -0.02
C9orf3-209ENST00000460573 SNRPEP62304 92 aaKnown RBP14.93□□□□□ -0.02
C9orf3-209ENST00000460573 CYSLTR1Q9Y271 337 aa14.93□□□□□ -0.02
C9orf3-209ENST00000460573 PYGO1Q9Y3Y4 419 aa14.93□□□□□ -0.02
C9orf3-209ENST00000460573 KIAA1109Q2LD37 5005 aa14.92□□□□□ -0.02
C9orf3-209ENST00000460573 FA2HQ7L5A8 372 aa14.92□□□□□ -0.02
C9orf3-209ENST00000460573 C18orf32Q8TCD1 76 aa14.92□□□□□ -0.02
C9orf3-209ENST00000460573 A0A087WTM6 91 aa14.91□□□□□ -0.02
C9orf3-209ENST00000460573 LINC01549A6NIU2 74 aa14.91□□□□□ -0.02
C9orf3-209ENST00000460573 C2orf66Q6UXQ4 117 aa14.91□□□□□ -0.02
C9orf3-209ENST00000460573 KRTAP17-1Q9BYP8 105 aa14.91□□□□□ -0.02
C9orf3-209ENST00000460573 IGKV3OR2-268A0A0C4DH90 116 aa14.9□□□□□ -0.02
C9orf3-209ENST00000460573 LRCOL1A6NCL2 159 aa14.9□□□□□ -0.02
C9orf3-209ENST00000460573 MRPS36P82909 103 aaKnown RBP14.9□□□□□ -0.02
C9orf3-209ENST00000460573 BAGE3Q86Y29 109 aa14.9□□□□□ -0.02
C9orf3-209ENST00000460573 PKHD1P08F94 4074 aa14.89□□□□□ -0.03
C9orf3-209ENST00000460573 CCL25O15444 150 aa14.89□□□□□ -0.03
C9orf3-209ENST00000460573 MAPKAPK5-AS1Q8N8E1 139 aa14.89□□□□□ -0.03
C9orf3-209ENST00000460573 IGLV10-54A0A075B6I4 117 aa14.88□□□□□ -0.03
C9orf3-209ENST00000460573 NPSP0C0P6 89 aa14.88□□□□□ -0.03
C9orf3-209ENST00000460573 KRTAP26-1Q6PEX3 210 aa14.88□□□□□ -0.03
C9orf3-209ENST00000460573 SPATA12Q7Z6I5 190 aa14.88□□□□□ -0.03
C9orf3-209ENST00000460573 AP5S1Q9NUS5 200 aa14.88□□□□□ -0.03
C9orf3-209ENST00000460573 LINC00959A0A1B0GUT2 108 aa14.87□□□□□ -0.03
C9orf3-209ENST00000460573 SS18Q15532 418 aa14.87□□□□□ -0.03
C9orf3-209ENST00000460573 Q6ZUT4 128 aa14.87□□□□□ -0.03
C9orf3-209ENST00000460573 LOC105371267A0A1B0GV96 52 aa14.86□□□□□ -0.03
C9orf3-209ENST00000460573 LINC00614P0C842 121 aa14.86□□□□□ -0.03
C9orf3-209ENST00000460573 TOMM6Q96B49 74 aa14.86□□□□□ -0.03
C9orf3-209ENST00000460573 BAALCQ8WXS3 180 aa14.85□□□□□ -0.03
C9orf3-209ENST00000460573 CHCHD10Q8WYQ3 142 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-209ENST00000460573 S100A2P29034 98 aa14.84□□□□□ -0.03
C9orf3-209ENST00000460573 HIST3H2BBQ8N257 126 aa14.84□□□□□ -0.03
C9orf3-209ENST00000460573 FAM104AQ969W3 186 aa14.84□□□□□ -0.03
C9orf3-209ENST00000460573 C14orf177Q52M58 125 aa14.83□□□□□ -0.04
C9orf3-209ENST00000460573 PAPPA-AS1Q5QFB9 102 aa14.83□□□□□ -0.04
C9orf3-209ENST00000460573 Q8N814 137 aa14.83□□□□□ -0.04
C9orf3-209ENST00000460573 CHCHD1Q96BP2 118 aaKnown RBP14.83□□□□□ -0.04
C9orf3-209ENST00000460573 TMEM141Q96I45 108 aa14.83□□□□□ -0.04
C9orf3-209ENST00000460573 PACRGQ96M98 296 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-209ENST00000460573 TIMM17AQ99595 171 aa14.83□□□□□ -0.04
C9orf3-209ENST00000460573 PGPEP1Q9NXJ5 209 aa14.83□□□□□ -0.04
C9orf3-209ENST00000460573 IGLV4-3A0A075B6K6 122 aa14.82□□□□□ -0.04
C9orf3-209ENST00000460573 GAGE12HA6NDE8 117 aa14.82□□□□□ -0.04
C9orf3-209ENST00000460573 IGIPA6NJ69 53 aa14.82□□□□□ -0.04
C9orf3-209ENST00000460573 RNASE13Q5GAN3 156 aaKnown RBP14.82□□□□□ -0.04
C9orf3-209ENST00000460573 Q6ZN92 141 aa14.82□□□□□ -0.04
C9orf3-209ENST00000460573 URB1-AS1Q96HZ7 61 aa14.82□□□□□ -0.04
C9orf3-209ENST00000460573 OPRPNQ99935 248 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-209ENST00000460573 PKD1P98161 4303 aa14.82□□□□□ -0.04
C9orf3-209ENST00000460573 SERF1AO75920 110 aa14.81□□□□□ -0.04
C9orf3-209ENST00000460573 CDPF1Q6NVV7 123 aa14.81□□□□□ -0.04
C9orf3-209ENST00000460573 ERASQ7Z444 233 aa14.81□□□□□ -0.04
C9orf3-209ENST00000460573 NTN5Q8WTR8 489 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-209ENST00000460573 TRAV13-1A0A0B4J241 112 aa14.8□□□□□ -0.04
C9orf3-209ENST00000460573 CD164L2Q6UWJ8 174 aa14.8□□□□□ -0.04
C9orf3-209ENST00000460573 TEX43Q6ZNM6 134 aa14.8□□□□□ -0.04
C9orf3-209ENST00000460573 SCGB3A1Q96QR1 104 aa14.8□□□□□ -0.04
C9orf3-209ENST00000460573 IFITM10A6NMD0 228 aa14.79□□□□□ -0.04
C9orf3-209ENST00000460573 LECT2O14960 151 aa14.79□□□□□ -0.04
C9orf3-209ENST00000460573 CDK2AP2O75956 126 aa14.79□□□□□ -0.04
C9orf3-209ENST00000460573 XCL1P47992 114 aa14.79□□□□□ -0.04
C9orf3-209ENST00000460573 WFDC2Q14508 124 aa14.79□□□□□ -0.04
C9orf3-209ENST00000460573 VCX2Q9H322 139 aa14.79□□□□□ -0.04
C9orf3-209ENST00000460573 DNAH11Q96DT5 4516 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms