RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
HERC4-207ENST00000460168 ATRQ13535 2644 aa7.64□□□□□ -1.19
HERC4-207ENST00000460168 AGRNO00468 2067 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 IGKV3D-20A0A0C4DH25 116 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 ARMS2P0C7Q2 107 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 LYZL1Q6UWQ5 148 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 MAP6D1Q9H9H5 199 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 C11orf21Q9P2W6 132 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 Q9UF83 564 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 A0A1B0GXF2 115 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 KNCNA6PVL3 124 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 KLLNB2CW77 178 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 UPK3BQ9BT76 320 aa7.63□□□□□ -1.19
HERC4-207ENST00000460168 SLC25A20O43772 301 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 RIGQ13278 110 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 SPINK13Q1W4C9 94 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 Q6ZRU5 148 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 CYSTM1Q9H1C7 97 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 SERP1Q9Y6X1 66 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 IGLV1-51P01701 117 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 CXCL5P42830 114 aa7.62□□□□□ -1.19
HERC4-207ENST00000460168 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
HERC4-207ENST00000460168 TRBV7-3A0A075B6L6 115 aa7.61□□□□□ -1.19
HERC4-207ENST00000460168 SMIM26A0A096LP01 95 aa7.61□□□□□ -1.19
HERC4-207ENST00000460168 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
HERC4-207ENST00000460168 ZNF56Q15929 161 aa7.61□□□□□ -1.19
HERC4-207ENST00000460168 ZNF575Q86XF7 245 aa7.61□□□□□ -1.19
HERC4-207ENST00000460168 NXT2Q9NPJ8 142 aaKnown RBP7.61□□□□□ -1.19
HERC4-207ENST00000460168 H3BMM0 161 aa7.6□□□□□ -1.19
HERC4-207ENST00000460168 ODF3L2Q3SX64 289 aa7.6□□□□□ -1.19
HERC4-207ENST00000460168 CD164L2Q6UWJ8 174 aa7.6□□□□□ -1.19
HERC4-207ENST00000460168 MAST4O15021 2626 aa7.6□□□□□ -1.19
HERC4-207ENST00000460168 H3BT86 120 aa7.6□□□□□ -1.19
HERC4-207ENST00000460168 GATA1P15976 413 aaPredicted RBP7.6□□□□□ -1.19
HERC4-207ENST00000460168 S100A4P26447 101 aaKnown RBP7.6□□□□□ -1.19
HERC4-207ENST00000460168 NPC2P61916 151 aa7.6□□□□□ -1.19
HERC4-207ENST00000460168 TWIST1Q15672 202 aa7.6□□□□□ -1.19
HERC4-207ENST00000460168 H3BS24 57 aa7.59□□□□□ -1.19
HERC4-207ENST00000460168 H3BVH4 76 aa7.59□□□□□ -1.19
HERC4-207ENST00000460168 ZFP2Q6ZN57 461 aa7.59□□□□□ -1.19
HERC4-207ENST00000460168 MRPL55Q7Z7F7 128 aaKnown RBP7.59□□□□□ -1.19
HERC4-207ENST00000460168 VWFP04275 2813 aa7.59□□□□□ -1.19
HERC4-207ENST00000460168 FXYD7P58549 80 aa7.59□□□□□ -1.19
HERC4-207ENST00000460168 KRTAP24-1Q3LI83 254 aa7.59□□□□□ -1.19
HERC4-207ENST00000460168 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
HERC4-207ENST00000460168 TIMM8BQ9Y5J9 83 aaPredicted RBP7.59□□□□□ -1.19
HERC4-207ENST00000460168 TMEM170BQ5T4T1 132 aa7.58□□□□□ -1.2
HERC4-207ENST00000460168 C5orf38Q86SI9 138 aa7.58□□□□□ -1.2
HERC4-207ENST00000460168 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
HERC4-207ENST00000460168 LOC107984156A0A0G2JMH3 177 aa7.58□□□□□ -1.2
HERC4-207ENST00000460168 DEFB121Q5J5C9 76 aa7.58□□□□□ -1.2
HERC4-207ENST00000460168 PRR15Q8IV56 129 aa7.58□□□□□ -1.2
HERC4-207ENST00000460168 ARL17AQ8IVW1 177 aa7.58□□□□□ -1.2
HERC4-207ENST00000460168 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
HERC4-207ENST00000460168 K7EMI3 77 aa7.57□□□□□ -1.2
HERC4-207ENST00000460168 GNRH2O43555 120 aa7.57□□□□□ -1.2
HERC4-207ENST00000460168 CMC4P56277 68 aaPredicted RBP7.57□□□□□ -1.2
HERC4-207ENST00000460168 HERVK_113P61574 105 aa7.57□□□□□ -1.2
HERC4-207ENST00000460168 CACNG7P62955 275 aa7.57□□□□□ -1.2
HERC4-207ENST00000460168 SPANXN1Q5VSR9 72 aa7.57□□□□□ -1.2
HERC4-207ENST00000460168 RBMY1BA6NDE4 496 aaKnown RBP7.56□□□□□ -1.2
HERC4-207ENST00000460168 RBMY1EA6NEQ0 496 aaKnown RBP7.56□□□□□ -1.2
HERC4-207ENST00000460168 A8MTW9 85 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 ACYP1P07311 99 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 RBMY1DP0C7P1 496 aaKnown RBP7.56□□□□□ -1.2
HERC4-207ENST00000460168 UBE2D1P51668 147 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 MSRB1Q9NZV6 116 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 LAMTOR3Q9UHA4 124 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 C9orf66Q5T8R8 295 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
HERC4-207ENST00000460168 NOTCH3Q9UM47 2321 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 M0R381 172 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 BEAN1Q3B7T3 259 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 FP248Q71RG6 208 aaPredicted RBP7.55□□□□□ -1.2
HERC4-207ENST00000460168 SERP2Q8N6R1 65 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 FBN1P35555 2871 aaKnown RBP7.55□□□□□ -1.2
HERC4-207ENST00000460168 IGHV1OR15-1A0A075B7D0 117 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 LINC01549A6NIU2 74 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
HERC4-207ENST00000460168 HTN1P15515 57 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 LINC00643Q86TS7 51 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 SPATA3Q8NHX4 192 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 UBE2WQ96B02 151 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 WFDC10AQ9H1F0 79 aa7.55□□□□□ -1.2
HERC4-207ENST00000460168 SPRY2O43597 315 aa7.54□□□□□ -1.2
HERC4-207ENST00000460168 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
HERC4-207ENST00000460168 FAM104BQ5XKR9 115 aa7.54□□□□□ -1.2
HERC4-207ENST00000460168 RBMY1A1P0DJD3 496 aaKnown RBP7.54□□□□□ -1.2
HERC4-207ENST00000460168 RBMY1CP0DJD4 496 aa7.54□□□□□ -1.2
HERC4-207ENST00000460168 DAZ2Q13117 558 aaKnown RBP7.54□□□□□ -1.2
HERC4-207ENST00000460168 RBMY1FQ15415 496 aaKnown RBP7.54□□□□□ -1.2
HERC4-207ENST00000460168 DAZ4Q86SG3 579 aaKnown RBP7.54□□□□□ -1.2
HERC4-207ENST00000460168 DAZ3Q9NR90 486 aaKnown RBP7.54□□□□□ -1.2
HERC4-207ENST00000460168 XCL2Q9UBD3 114 aa7.54□□□□□ -1.2
HERC4-207ENST00000460168 IGHV4-4A0A075B6R2 117 aa7.53□□□□□ -1.2
HERC4-207ENST00000460168 INSP01308 110 aa7.53□□□□□ -1.2
HERC4-207ENST00000460168 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms