RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TRAV8-4A0A0B4J246 113 aa11.56□□□□□ -0.56
CMTM3-203ENST00000460097 RPL39P62891 51 aaKnown RBP11.56□□□□□ -0.56
CMTM3-203ENST00000460097 MUSTN1Q8IVN3 82 aa11.56□□□□□ -0.56
CMTM3-203ENST00000460097 WFDC9Q8NEX5 89 aa11.56□□□□□ -0.56
CMTM3-203ENST00000460097 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
CMTM3-203ENST00000460097 ZNF22P17026 224 aaPredicted RBP11.55□□□□□ -0.56
CMTM3-203ENST00000460097 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
CMTM3-203ENST00000460097 LINC00482Q8N8I6 264 aa11.55□□□□□ -0.56
CMTM3-203ENST00000460097 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
CMTM3-203ENST00000460097 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
CMTM3-203ENST00000460097 SPANXCQ9NY87 97 aa11.55□□□□□ -0.56
CMTM3-203ENST00000460097 TRPT1Q86TN4 253 aaKnown RBP11.54□□□□□ -0.56
CMTM3-203ENST00000460097 SS18L2Q9UHA2 77 aa11.54□□□□□ -0.56
CMTM3-203ENST00000460097 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
CMTM3-203ENST00000460097 TRAV4A0A0B4J268 109 aa11.54□□□□□ -0.56
CMTM3-203ENST00000460097 H3BMM0 161 aa11.54□□□□□ -0.56
CMTM3-203ENST00000460097 EMP1P54849 157 aa11.54□□□□□ -0.56
CMTM3-203ENST00000460097 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
CMTM3-203ENST00000460097 UBE2WQ96B02 151 aa11.54□□□□□ -0.56
CMTM3-203ENST00000460097 A0A0J9YXY3 114 aa11.53□□□□□ -0.56
CMTM3-203ENST00000460097 B5MCH6 92 aa11.53□□□□□ -0.56
CMTM3-203ENST00000460097 M0QY20 66 aa11.53□□□□□ -0.56
CMTM3-203ENST00000460097 TRBV12-3P01733 135 aa11.53□□□□□ -0.56
CMTM3-203ENST00000460097 TRAV2A0A0B4J234 112 aa11.52□□□□□ -0.57
CMTM3-203ENST00000460097 J3KRW8 73 aa11.52□□□□□ -0.57
CMTM3-203ENST00000460097 SPRY2O43597 315 aa11.52□□□□□ -0.57
CMTM3-203ENST00000460097 SLURP1P55000 103 aa11.52□□□□□ -0.57
CMTM3-203ENST00000460097 UNQ9165/PRO28630Q6UXU0 137 aa11.52□□□□□ -0.57
CMTM3-203ENST00000460097 FAM110AQ9BQ89 295 aa11.52□□□□□ -0.57
CMTM3-203ENST00000460097 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
CMTM3-203ENST00000460097 MGAM2Q2M2H8 2515 aa11.52□□□□□ -0.57
CMTM3-203ENST00000460097 COX6CP09669 75 aa11.51□□□□□ -0.57
CMTM3-203ENST00000460097 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
CMTM3-203ENST00000460097 ID1P41134 155 aa11.51□□□□□ -0.57
CMTM3-203ENST00000460097 LITAFQ99732 161 aa11.51□□□□□ -0.57
CMTM3-203ENST00000460097 K7EMT4 169 aa11.51□□□□□ -0.57
CMTM3-203ENST00000460097 IGHV3-16A0A0C4DH30 117 aa11.5□□□□□ -0.57
CMTM3-203ENST00000460097 I3L3M4 83 aa11.5□□□□□ -0.57
CMTM3-203ENST00000460097 TRIAP1O43715 76 aa11.5□□□□□ -0.57
CMTM3-203ENST00000460097 TIMM17BO60830 172 aa11.5□□□□□ -0.57
CMTM3-203ENST00000460097 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
CMTM3-203ENST00000460097 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
CMTM3-203ENST00000460097 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
CMTM3-203ENST00000460097 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
CMTM3-203ENST00000460097 F5H697 171 aa11.49□□□□□ -0.57
CMTM3-203ENST00000460097 Q1RN00 199 aa11.49□□□□□ -0.57
CMTM3-203ENST00000460097 NOTCH3Q9UM47 2321 aa11.49□□□□□ -0.57
CMTM3-203ENST00000460097 IMUPQ9GZP8 106 aa11.49□□□□□ -0.57
CMTM3-203ENST00000460097 ICOSQ9Y6W8 199 aa11.49□□□□□ -0.57
CMTM3-203ENST00000460097 C2orf82Q6UX34 121 aa11.48□□□□□ -0.57
CMTM3-203ENST00000460097 TEX49A0A1B0GTD5 131 aa11.47□□□□□ -0.57
CMTM3-203ENST00000460097 H7C423 109 aa11.47□□□□□ -0.57
CMTM3-203ENST00000460097 ACYP1P07311 99 aa11.47□□□□□ -0.57
CMTM3-203ENST00000460097 IGHV3-30-3P0DP02 117 aa11.47□□□□□ -0.57
CMTM3-203ENST00000460097 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
CMTM3-203ENST00000460097 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
CMTM3-203ENST00000460097 RHPN1-AS1Q9BWJ2 59 aa11.47□□□□□ -0.57
CMTM3-203ENST00000460097 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
CMTM3-203ENST00000460097 A0A087WWL8 130 aa11.46□□□□□ -0.57
CMTM3-203ENST00000460097 IGHV1-58A0A0C4DH39 117 aa11.46□□□□□ -0.57
CMTM3-203ENST00000460097 F6UB75 175 aa11.46□□□□□ -0.57
CMTM3-203ENST00000460097 LST1O00453 97 aa11.46□□□□□ -0.57
CMTM3-203ENST00000460097 MIAQ16674 131 aa11.46□□□□□ -0.57
CMTM3-203ENST00000460097 TIMM21Q9BVV7 248 aa11.46□□□□□ -0.57
CMTM3-203ENST00000460097 JPT2Q9H910 190 aa11.46□□□□□ -0.57
CMTM3-203ENST00000460097 MUC4Q99102 2169 aa11.46□□□□□ -0.58
CMTM3-203ENST00000460097 CCDC179H3BU77 68 aa11.46□□□□□ -0.58
CMTM3-203ENST00000460097 A0A0J9YXV3 536 aa11.45□□□□□ -0.58
CMTM3-203ENST00000460097 C9orf66Q5T8R8 295 aa11.45□□□□□ -0.58
CMTM3-203ENST00000460097 TMEM126AQ9H061 195 aa11.45□□□□□ -0.58
CMTM3-203ENST00000460097 DCANP1Q8TF63 244 aa11.44□□□□□ -0.58
CMTM3-203ENST00000460097 PEMTQ9UBM1 199 aa11.44□□□□□ -0.58
CMTM3-203ENST00000460097 TINCRA0A1B0GVN0 87 aa11.44□□□□□ -0.58
CMTM3-203ENST00000460097 DEFB1P60022 68 aa11.44□□□□□ -0.58
CMTM3-203ENST00000460097 ZNF56Q15929 161 aa11.44□□□□□ -0.58
CMTM3-203ENST00000460097 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
CMTM3-203ENST00000460097 H7C2G1 150 aa11.43□□□□□ -0.58
CMTM3-203ENST00000460097 RPL11P62913 178 aaKnown RBP11.43□□□□□ -0.58
CMTM3-203ENST00000460097 PIK3CD-AS1Q5SR53 167 aa11.43□□□□□ -0.58
CMTM3-203ENST00000460097 TMEM61Q8N0U2 210 aa11.43□□□□□ -0.58
CMTM3-203ENST00000460097 IGHV1OR15-1A0A075B7D0 117 aa11.42□□□□□ -0.58
CMTM3-203ENST00000460097 OPRPNQ99935 248 aaPredicted RBP11.42□□□□□ -0.58
CMTM3-203ENST00000460097 VSIG2Q96IQ7 327 aa11.41□□□□□ -0.58
CMTM3-203ENST00000460097 PPDPFQ9H3Y8 114 aa11.41□□□□□ -0.58
CMTM3-203ENST00000460097 NDUFA12Q9UI09 145 aa11.41□□□□□ -0.58
CMTM3-203ENST00000460097 TRGV11A0A075B6L2 103 aa11.41□□□□□ -0.58
CMTM3-203ENST00000460097 TRAV12-3A0A0B4J271 114 aa11.41□□□□□ -0.58
CMTM3-203ENST00000460097 WIPF1O43516 503 aa11.41□□□□□ -0.58
CMTM3-203ENST00000460097 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
CMTM3-203ENST00000460097 BEAN1Q3B7T3 259 aa11.4□□□□□ -0.58
CMTM3-203ENST00000460097 FAM74A4Q5TZK3 123 aa11.4□□□□□ -0.58
CMTM3-203ENST00000460097 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
CMTM3-203ENST00000460097 ATP5G1P05496 136 aa11.39□□□□□ -0.59
CMTM3-203ENST00000460097 KPRPQ5T749 579 aaPredicted RBP11.39□□□□□ -0.59
CMTM3-203ENST00000460097 NOTCH1P46531 2555 aa11.39□□□□□ -0.59
CMTM3-203ENST00000460097 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
CMTM3-203ENST00000460097 COPS9Q8WXC6 57 aa11.39□□□□□ -0.59
CMTM3-203ENST00000460097 EGFEM1PQ0D2K5 195 aa11.38□□□□□ -0.59
CMTM3-203ENST00000460097 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
CMTM3-203ENST00000460097 SPXQ9BT56 116 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms