RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 MIAQ16674 131 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 Q6Q795 121 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 Q6ZUT4 128 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 ANKRD29Q8N6D5 301 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 VSIG2Q96IQ7 327 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 LITAFQ99732 161 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 CHCHD7Q9BUK0 85 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 ZNF702PQ9H963 129 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 CSDC2Q9Y534 153 aaKnown RBP4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 FN1P02751 2386 aaKnown RBP4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 H3BT86 120 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 EIF4EBP3O60516 100 aaPredicted RBP4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 CD28P10747 220 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 HILS1P60008 231 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 DEFB121Q5J5C9 76 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 SHISA2Q6UWI4 295 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 DUX5Q96PT3 197 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 SMR3AQ99954 134 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 FAM110AQ9BQ89 295 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 UBE2D4Q9Y2X8 147 aa4.46□□□□□ -1.7
UBQLN4-202ENST00000459954 C9JAW5 83 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 NDUFA1O15239 70 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 IGKV3-20P01619 116 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 RBMY1A1P0DJD3 496 aaKnown RBP4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 RBMY1CP0DJD4 496 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 CMC4P56277 68 aaPredicted RBP4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 CIRBPQ14011 172 aaKnown RBP4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 RBMY1FQ15415 496 aaKnown RBP4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 C11orf72Q8NBR9 251 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 C4orf3Q8WVX3 66 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 RAX2Q96IS3 184 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 DUX3Q96PT4 197 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 NDUFA12Q9UI09 145 aa4.45□□□□□ -1.7
UBQLN4-202ENST00000459954 TRBV10-1A0A0K0K1A3 114 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 FAM240AA0A1B0GVK7 77 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 INSP01308 110 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 XGP55808 180 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 DEFB131AP59861 70 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 HERVK_113P63121 156 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 C10orf99Q6UWK7 81 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 IL17DQ8TAD2 202 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 GEMIN7Q9H840 131 aaKnown RBP4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 ICOSQ9Y6W8 199 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
UBQLN4-202ENST00000459954 IGLV5-39A0A0G2JS06 123 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 RBMY1BA6NDE4 496 aaKnown RBP4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 RBMY1EA6NEQ0 496 aaKnown RBP4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 KNCNA6PVL3 124 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 H7C423 109 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 TRIAP1O43715 76 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 MT-ATP8P03928 68 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 RNASE1P07998 156 aaKnown RBP4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 RBMY1DP0C7P1 496 aaKnown RBP4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 HERV-K104P63124 156 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 FHL3Q13643 280 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 Q1RN00 199 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 DEFB114Q30KQ6 69 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 TMEM61Q8N0U2 210 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 SPATA3Q8NHX4 192 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 MAP6D1Q9H9H5 199 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 SVEP1Q4LDE5 3571 aa4.43□□□□□ -1.7
UBQLN4-202ENST00000459954 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 TRAV4A0A0B4J268 109 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 LST1O00453 97 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 NDUFA7O95182 113 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 PRSS2P07478 247 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 DAZ2Q13117 558 aaKnown RBP4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 ADAMTSL4-AS1Q5T5F5 129 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 SFTA2Q6UW10 78 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 DAZ4Q86SG3 579 aaKnown RBP4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 NTN5Q8WTR8 489 aaPredicted RBP4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 UBE2WQ96B02 151 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 TMEM101Q96IK0 257 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 LINC01587Q99440 93 aa4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 DAZ3Q9NR90 486 aaKnown RBP4.42□□□□□ -1.7
UBQLN4-202ENST00000459954 TRAV8-4A0A0B4J246 113 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 PF4P02776 101 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 ACYP1P07311 99 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 SLURP1P55000 103 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 RPL36AP83881 106 aaKnown RBP4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 DGAT2L7PQ6IED9 249 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 C2orf82Q6UX34 121 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 Q6ZSN1 163 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 DYNLRB2Q8TF09 96 aa4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 RPL36ALQ969Q0 106 aaKnown RBP4.41□□□□□ -1.7
UBQLN4-202ENST00000459954 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 IGHV3OR16-12A0A075B7B8 117 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 SNCGO76070 127 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 PROK1P58294 105 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE2BQ13066 116 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 GAGE2EQ4V326 116 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 LINC00308Q8TCZ7 52 aa4.4□□□□□ -1.71
UBQLN4-202ENST00000459954 DEFB104AQ8WTQ1 72 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms