RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 H3BUT2 72 aa7.4□□□□□ -1.23
USP39-210ENST00000459775 PLAC8L1A1L4L8 177 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 SNCGO76070 127 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 CRYGAP11844 174 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 GAGE2AQ6NT46 116 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 KCNS1Q96KK3 526 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 PRELID3AQ96N28 172 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 ATP5G1P05496 136 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 TWIST1Q15672 202 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 GFRA4Q9GZZ7 299 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 COL7A1Q02388 2944 aa7.39□□□□□ -1.23
USP39-210ENST00000459775 MUC4Q99102 2169 aa7.38□□□□□ -1.23
USP39-210ENST00000459775 DAZ2Q13117 558 aaKnown RBP7.38□□□□□ -1.23
USP39-210ENST00000459775 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
USP39-210ENST00000459775 TMEM256Q8N2U0 113 aa7.38□□□□□ -1.23
USP39-210ENST00000459775 OVOL2Q9BRP0 275 aa7.38□□□□□ -1.23
USP39-210ENST00000459775 NOP10Q9NPE3 64 aaKnown RBP7.38□□□□□ -1.23
USP39-210ENST00000459775 SCRT2Q9NQ03 307 aa7.38□□□□□ -1.23
USP39-210ENST00000459775 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
USP39-210ENST00000459775 PHLDA3Q9Y5J5 127 aa7.38□□□□□ -1.23
USP39-210ENST00000459775 A0A1B0GUT8 65 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 SPANXN1Q5VSR9 72 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 KMT2CQ8NEZ4 4911 aaKnown RBP7.37□□□□□ -1.23
USP39-210ENST00000459775 TRGV11A0A075B6L2 103 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 EPM2AB3EWF7 344 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 H3BMG7 143 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 WFDC2Q14508 124 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 ZNF876PQ49A33 203 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 Q6ZTI0 123 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 ANKRD29Q8N6D5 301 aa7.37□□□□□ -1.23
USP39-210ENST00000459775 IGHV4-28A0A0C4DH34 117 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 A0A1B0GXF2 115 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 APOMO95445 188 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 ETDBQ3ZM63 59 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 IGHV3-73A0A0B4J1V6 119 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 C3orf84H3BNL1 204 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 GAS8-AS1O95177 125 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 SLC25A34Q6PIV7 304 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 C14orf178Q8N769 122 aaPredicted RBP7.36□□□□□ -1.23
USP39-210ENST00000459775 TMEM263Q8WUH6 116 aaKnown RBP7.36□□□□□ -1.23
USP39-210ENST00000459775 LINC00467Q9BRT7 94 aa7.36□□□□□ -1.23
USP39-210ENST00000459775 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
USP39-210ENST00000459775 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 TRAV4A0A0B4J268 109 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 SNURFLB1AK76 121 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 F2Z2F3 143 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 SYS1-DBNDD2H3BUS1 97 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 TMEM136Q6ZRR5 245 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 SPATA12Q7Z6I5 190 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 B9D2Q9BPU9 175 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 DNAH9Q9NYC9 4486 aa7.35□□□□□ -1.23
USP39-210ENST00000459775 IGHV3-53P01767 116 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 HBBP68871 147 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 FAM74A4Q5TZK3 123 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 AMN1Q8IY45 258 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 Q8NAQ8 132 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 CNFNQ9BYD5 112 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 CELA1Q9UNI1 258 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 RYR3Q15413 4870 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 DEFB130BP0DP73 79 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 DEFB130AP0DP74 79 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 GYPEP15421 78 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 RIGQ13278 110 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 LAGE3Q14657 143 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 POM121L12Q8N7R1 296 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 PPDPFLQ8WWR9 84 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 C16orf74Q96GX8 76 aa7.34□□□□□ -1.23
USP39-210ENST00000459775 IGHV4-4A0A075B6R2 117 aa7.33□□□□□ -1.24
USP39-210ENST00000459775 TRAV13-1A0A0B4J241 112 aa7.33□□□□□ -1.24
USP39-210ENST00000459775 NXPH4O95158 308 aa7.33□□□□□ -1.24
USP39-210ENST00000459775 FAM222AQ5U5X8 452 aa7.33□□□□□ -1.24
USP39-210ENST00000459775 SH2D6Q7Z4S9 175 aa7.33□□□□□ -1.24
USP39-210ENST00000459775 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
USP39-210ENST00000459775 PRO0461Q9UI25 63 aa7.33□□□□□ -1.24
USP39-210ENST00000459775 TRAPPC1Q9Y5R8 145 aa7.33□□□□□ -1.24
USP39-210ENST00000459775 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 NUPR1O60356 82 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
USP39-210ENST00000459775 TRACP01848 142 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 GAGE13Q4V321 117 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 Q6ZSN1 163 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 ATP5L2Q7Z4Y8 100 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 RNF185Q96GF1 192 aa7.32□□□□□ -1.24
USP39-210ENST00000459775 MGPP08493 103 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 LINC00315P59091 139 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 KRTDAPP60985 99 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 CACNG7P62955 275 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 ZNF493Q6ZR52 646 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 RBM12B-AS1Q9P1G2 102 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 KIF25-AS1Q9Y6Z4 181 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 A0A0J9YWU9 116 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 CFAP126Q5VTH2 177 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 TM2D3Q9BRN9 247 aa7.31□□□□□ -1.24
USP39-210ENST00000459775 APCSP02743 223 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 MIFP14174 115 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 MRPL51Q4U2R6 128 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms