RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LELP1Q5T871 98 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 ZNF664Q8N3J9 261 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 URB1-AS1Q96HZ7 61 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 VSIG2Q96IQ7 327 aa4.11□□□□□ -1.75
RNU1-88P-201ENST00000459274 SVEP1Q4LDE5 3571 aa4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 COL6A5A8TX70 2615 aa4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGKV2-29A2NJV5 120 aaPredicted RBP4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 F8VRH5 84 aa4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 ANGP03950 147 aaKnown RBP4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 RPL39P62891 51 aaKnown RBP4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 HERVK_113P63121 156 aa4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 MRPS36P82909 103 aaKnown RBP4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 GAGE6Q13070 117 aa4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 MRPL52Q86TS9 123 aaKnown RBP4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 CHCHD7Q9BUK0 85 aa4.1□□□□□ -1.75
RNU1-88P-201ENST00000459274 STAB1Q9NY15 2570 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 ZFHX3Q15911 3703 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGKV3OR2-268A0A0C4DH90 116 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 A0A1B0GUV1 79 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 PRSS29PA6NIE9 313 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 IGIPA6NJ69 53 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 TIRAPP58753 221 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 LINC00310P59036 64 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 LINC01545Q5VT33 79 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 BAALCQ8WXS3 180 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 RMI2Q96E14 147 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 PMCHL2Q9BQD1 86 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 CST9LQ9H4G1 147 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 UBE2D4Q9Y2X8 147 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 PAM16Q9Y3D7 125 aa4.09□□□□□ -1.75
RNU1-88P-201ENST00000459274 TRAV13-1A0A0B4J241 112 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 LGALS3P17931 250 aaKnown RBP4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 MALP21145 153 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 GCSHP23434 173 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 SPATA45Q537H7 98 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 PYY3Q5JQD4 70 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 LYPD5Q6UWN5 251 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC00518Q8N0U6 118 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 ATOH7Q8N100 152 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 C10orf126Q8N4M7 172 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 CHAC1Q9BUX1 264 aa4.08□□□□□ -1.76
RNU1-88P-201ENST00000459274 IGLV4-3A0A075B6K6 122 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 A0A096LNJ9 63 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 TINCRA0A1B0GVN0 87 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 PCP4L1A6NKN8 68 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 K7EP13 123 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 APOMO95445 188 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 PRSS2P07478 247 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 NMUP48645 174 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 CIRBPQ14011 172 aaKnown RBP4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 ODF1Q14990 250 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 CEMP1Q6PRD7 247 aaPredicted RBP4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 NTM-AS1Q6ZSK4 140 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC00173Q6ZV60 143 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC00469Q8N7U9 141 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 PLEKHB2Q96CS7 222 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 MRPL35Q9NZE8 188 aaKnown RBP4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 UQCR10Q9UDW1 63 aa4.07□□□□□ -1.76
RNU1-88P-201ENST00000459274 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC00587B1AMM8 73 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 SIVA1O15304 175 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 RBX1P62877 108 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 REG3AQ06141 175 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 SLC25A34Q6PIV7 304 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 SFTA2Q6UW10 78 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 SCGB1D4Q6XE38 83 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 COPS9Q8WXC6 57 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 AMELXQ99217 191 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 Q9UF83 564 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 COX11Q9Y6N1 276 aa4.06□□□□□ -1.76
RNU1-88P-201ENST00000459274 TRAV8-3A0A0A6YYJ7 113 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 A0A0J9YXV3 536 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 IGHV3-30P01768 117 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 IGHV3-33P01772 117 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC00694P0DN24 101 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 IGLC3P0DOY3 106 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 IGHV3-30-3P0DP02 117 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 IGHV3-30-5P0DP03 117 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 MIAQ16674 131 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 RNASE13Q5GAN3 156 aaKnown RBP4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 CFAP161Q6P656 301 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 Q6ZUT4 128 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 LINC00269Q8N2A0 174 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 OPRPNQ99935 248 aaPredicted RBP4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 C1orf43Q9BWL3 253 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 KLK12Q9UKR0 248 aa4.05□□□□□ -1.76
RNU1-88P-201ENST00000459274 TENM1Q9UKZ4 2725 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 AKAP9Q99996 3911 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 MYMXA0A1B0GTQ4 84 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 hDV102S1A0JD36 115 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 PSCAO43653 123 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 UBE2D1P51668 147 aa4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 HNRNPA3P51991 378 aaKnown RBP4.04□□□□□ -1.76
RNU1-88P-201ENST00000459274 CKS1BP61024 79 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms